SNP Report

Basic Infomation

Name	rs11624484 dbSNP
Location	chr:14,68550001
Allele	G/A

LD-proxy of rSNPs(r²>0.8) (count: 109)

The LD data used here is based on HapMap rel#27 and 1000 Genomes phase I data. LD SNP pairs were selected with a threshold r² >=0.8.

rs_ID	r²[population][source]
rs10137233	0.87[AMR][1000 genomes];0.88[EUR][1000 genomes]
rs10139236	0.85[CEU][hapmap];0.91[AMR][1000 genomes];0.88[EUR][1000 genomes]
rs10139386	0.85[CEU][hapmap];0.87[AMR][1000 genomes];0.88[EUR][1000 genomes]
rs10140420	0.87[AMR][1000 genomes];0.88[EUR][1000 genomes]
rs10140493	0.87[AMR][1000 genomes];0.88[EUR][1000 genomes]
rs10151115	0.87[AMR][1000 genomes];0.85[EUR][1000 genomes]
rs1080956	0.87[AMR][1000 genomes];0.85[EUR][1000 genomes]
rs1080957	0.85[CEU][hapmap];0.87[AMR][1000 genomes];0.85[EUR][1000 genomes]
rs1080958	0.90[CEU][hapmap];0.87[AMR][1000 genomes];0.85[EUR][1000 genomes]
rs11158716	0.84[CEU][hapmap];1.00[CHB][hapmap];1.00[JPT][hapmap];0.89[YRI][hapmap];0.86[AFR][1000 genomes];0.82[EUR][1000 genomes];0.87[ASN][1000 genomes]
rs11158718	0.94[CEU][hapmap];1.00[CHB][hapmap];1.00[JPT][hapmap];0.92[AMR][1000 genomes];0.94[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs11158719	0.85[CEU][hapmap];0.91[AMR][1000 genomes];0.88[EUR][1000 genomes]
rs11622135	0.84[CEU][hapmap];1.00[CHB][hapmap];1.00[JPT][hapmap];0.89[YRI][hapmap];0.87[AFR][1000 genomes];0.83[EUR][1000 genomes];0.87[ASN][1000 genomes]
rs11623467	0.83[EUR][1000 genomes]
rs11624209	0.91[AMR][1000 genomes];0.88[EUR][1000 genomes]
rs11624609	0.84[CEU][hapmap];1.00[CHB][hapmap];0.88[YRI][hapmap];0.86[AFR][1000 genomes];0.82[EUR][1000 genomes];0.88[ASN][1000 genomes]
rs11628745	0.87[AMR][1000 genomes];0.88[EUR][1000 genomes]
rs11629073	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes];0.94[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs11848769	0.84[CEU][hapmap];1.00[CHB][hapmap];1.00[JPT][hapmap];0.82[YRI][hapmap];0.85[AFR][1000 genomes];0.83[EUR][1000 genomes];0.87[ASN][1000 genomes]
rs11850946	0.84[CEU][hapmap];1.00[CHB][hapmap];1.00[JPT][hapmap];0.82[EUR][1000 genomes];0.87[ASN][1000 genomes]
rs11852208	0.86[AFR][1000 genomes];0.82[EUR][1000 genomes];0.87[ASN][1000 genomes]
rs12432193	0.86[ASN][1000 genomes]
rs12432558	1.00[CHB][hapmap];1.00[JPT][hapmap]
rs12433779	1.00[JPT][hapmap]
rs12435554	0.84[CEU][hapmap];1.00[CHB][hapmap];1.00[JPT][hapmap];0.82[YRI][hapmap];0.85[AFR][1000 genomes];0.80[EUR][1000 genomes]
rs12436203	0.92[AMR][1000 genomes];0.91[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs12437276	0.83[AFR][1000 genomes];0.83[EUR][1000 genomes];0.87[ASN][1000 genomes]
rs12437441	1.00[JPT][hapmap];0.86[ASN][1000 genomes]
rs1548264	0.85[CEU][hapmap];0.84[AMR][1000 genomes];0.88[EUR][1000 genomes]
rs1548265	0.85[CEU][hapmap];0.87[AMR][1000 genomes];0.88[EUR][1000 genomes]
rs17104889	0.85[CEU][hapmap];0.87[AMR][1000 genomes];0.88[EUR][1000 genomes]
rs17104908	0.94[CEU][hapmap];0.84[EUR][1000 genomes]
rs17192558	0.84[CEU][hapmap];1.00[CHB][hapmap];1.00[JPT][hapmap];0.82[EUR][1000 genomes];0.87[ASN][1000 genomes]
rs17192586	0.84[CEU][hapmap];1.00[CHB][hapmap];1.00[JPT][hapmap];0.81[YRI][hapmap];0.85[AFR][1000 genomes];0.81[EUR][1000 genomes];0.87[ASN][1000 genomes]
rs17783304	0.84[CEU][hapmap];1.00[CHB][hapmap];1.00[JPT][hapmap];0.83[YRI][hapmap];0.85[AFR][1000 genomes];0.82[EUR][1000 genomes];0.87[ASN][1000 genomes]
rs1810639	0.87[AMR][1000 genomes];0.88[EUR][1000 genomes]
rs1951410	0.83[AMR][1000 genomes];0.87[EUR][1000 genomes]
rs2038565	0.84[CEU][hapmap];1.00[CHB][hapmap];1.00[JPT][hapmap];0.89[YRI][hapmap];0.96[AFR][1000 genomes];0.87[AMR][1000 genomes];0.88[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs2588807	0.83[CEU][hapmap]
rs2588823	0.84[CEU][hapmap]
rs2588830	0.89[CEU][hapmap]
rs2588831	0.90[CEU][hapmap]
rs2588832	0.89[CEU][hapmap]
rs2588833	0.94[CEU][hapmap];0.81[EUR][1000 genomes]
rs2588834	0.94[CEU][hapmap];0.85[AMR][1000 genomes];0.83[EUR][1000 genomes]
rs2767365	0.89[CEU][hapmap];0.82[AMR][1000 genomes]
rs2767366	0.85[CEU][hapmap]
rs28649231	0.83[AFR][1000 genomes]
rs33949561	0.81[EUR][1000 genomes]
rs34558039	0.89[EUR][1000 genomes]
rs34588410	0.86[AFR][1000 genomes];0.83[EUR][1000 genomes];0.87[ASN][1000 genomes]
rs34723132	0.82[AFR][1000 genomes];0.80[EUR][1000 genomes]
rs35517486	0.86[ASN][1000 genomes]
rs365934	0.84[EUR][1000 genomes]
rs372143	0.94[CEU][hapmap];0.84[EUR][1000 genomes]
rs373918	0.94[CEU][hapmap];0.84[EUR][1000 genomes]
rs378408	0.84[EUR][1000 genomes]
rs401021	0.94[CEU][hapmap];0.84[EUR][1000 genomes]
rs411547	0.95[CEU][hapmap];0.84[EUR][1000 genomes]
rs419450	0.83[AMR][1000 genomes];0.87[EUR][1000 genomes]
rs431649	0.94[CEU][hapmap];0.84[EUR][1000 genomes]
rs435620	0.94[CEU][hapmap];0.84[EUR][1000 genomes]
rs437585	0.95[CEU][hapmap];0.81[EUR][1000 genomes]
rs440627	0.81[AMR][1000 genomes];0.87[EUR][1000 genomes]
rs445921	0.82[AMR][1000 genomes];0.87[EUR][1000 genomes]
rs448445	0.95[CEU][hapmap];0.83[AMR][1000 genomes];0.87[EUR][1000 genomes]
rs4899231	0.87[AMR][1000 genomes];0.85[EUR][1000 genomes]
rs4899232	0.86[AMR][1000 genomes];0.84[EUR][1000 genomes]
rs4902545	0.87[AMR][1000 genomes];0.82[EUR][1000 genomes]
rs4902547	0.91[AMR][1000 genomes];0.88[EUR][1000 genomes]
rs57069083	0.81[AMR][1000 genomes];0.84[EUR][1000 genomes]
rs67566613	0.84[AMR][1000 genomes];0.85[EUR][1000 genomes]
rs68139749	0.87[AMR][1000 genomes];0.88[EUR][1000 genomes]
rs7141160	0.94[CEU][hapmap];1.00[JPT][hapmap];0.85[AMR][1000 genomes];0.87[EUR][1000 genomes]
rs7141450	0.94[CEU][hapmap];1.00[JPT][hapmap];0.81[AMR][1000 genomes];0.87[EUR][1000 genomes]
rs7145044	0.88[CEU][hapmap];1.00[CHB][hapmap];1.00[JPT][hapmap];0.81[YRI][hapmap];0.82[AFR][1000 genomes];0.80[EUR][1000 genomes]
rs7150168	0.81[CEU][hapmap];0.87[AMR][1000 genomes];0.83[EUR][1000 genomes]
rs7150705	1.00[CHB][hapmap];1.00[JPT][hapmap]
rs7150903	1.00[CHB][hapmap];1.00[JPT][hapmap]
rs7151235	0.86[CEU][hapmap];0.85[EUR][1000 genomes]
rs7151917	0.85[AFR][1000 genomes];0.80[EUR][1000 genomes]
rs7154014	0.96[AFR][1000 genomes];0.87[AMR][1000 genomes];0.88[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs7155985	0.85[AFR][1000 genomes];0.80[EUR][1000 genomes]
rs7160115	0.84[CEU][hapmap];1.00[CHB][hapmap]
rs72725141	0.85[AFR][1000 genomes];0.80[EUR][1000 genomes]
rs72725149	0.85[AFR][1000 genomes];0.82[EUR][1000 genomes];0.87[ASN][1000 genomes]
rs72725151	0.87[AFR][1000 genomes];0.83[EUR][1000 genomes];0.87[ASN][1000 genomes]
rs72725153	0.86[AFR][1000 genomes];0.83[EUR][1000 genomes];0.87[ASN][1000 genomes]
rs72725156	0.87[ASN][1000 genomes]
rs72725157	0.86[AFR][1000 genomes];0.83[EUR][1000 genomes];0.87[ASN][1000 genomes]
rs72725159	0.87[ASN][1000 genomes]
rs72725165	0.86[AFR][1000 genomes];0.82[EUR][1000 genomes];0.87[ASN][1000 genomes]
rs72725168	0.86[AFR][1000 genomes];0.83[AMR][1000 genomes];0.83[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs72725170	0.86[AFR][1000 genomes];0.83[AMR][1000 genomes];0.83[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs72725172	0.96[AFR][1000 genomes];0.87[AMR][1000 genomes];0.88[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs72725174	0.84[EUR][1000 genomes];0.94[ASN][1000 genomes]
rs72725183	0.92[AMR][1000 genomes];0.91[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs72725185	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes];0.99[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs72725186	0.92[AMR][1000 genomes];0.94[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs72725187	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes];0.99[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs72725188	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes];0.99[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs72725190	0.91[AMR][1000 genomes];0.88[EUR][1000 genomes]
rs8011621	0.82[AMR][1000 genomes];0.82[EUR][1000 genomes]
rs8014000	0.85[CEU][hapmap];0.87[AMR][1000 genomes];0.88[EUR][1000 genomes]
rs8014524	0.81[AMR][1000 genomes];0.87[EUR][1000 genomes]
rs8015128	0.84[CEU][hapmap];1.00[CHB][hapmap];1.00[JPT][hapmap];0.89[YRI][hapmap];0.96[AFR][1000 genomes];0.87[AMR][1000 genomes];0.88[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs8021404	0.84[CEU][hapmap];1.00[CHB][hapmap];1.00[JPT][hapmap];0.89[YRI][hapmap];0.95[AFR][1000 genomes];0.87[AMR][1000 genomes];0.88[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs8022206	0.82[CEU][hapmap];1.00[CHB][hapmap];1.00[JPT][hapmap];0.89[YRI][hapmap];0.95[AFR][1000 genomes];0.87[AMR][1000 genomes];0.88[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs9323502	0.81[EUR][1000 genomes]

rSNP related genes

Symbol	Regulation type
RAD51B	RNA binding protein mediated regulation

rSNP related regulatory elements

Proximal transcriptional regulation

Distal transcriptional regulation

Post-transcriptional regulation:within mature miRNA

Post-transcriptional regulation: associated with RNA binding protein

eQTL evidence (count: 0)