SNP Report

Basic Infomation

Name	rs17192586 dbSNP
Location	chr:14,68454505
Allele	G/A

LD-proxy of rSNPs(r²>0.8) (count: 181)

The LD data used here is based on HapMap rel#27 and 1000 Genomes phase I data. LD SNP pairs were selected with a threshold r² >=0.8.

rs_ID	r²[population][source]
rs10129355	0.85[CEU][hapmap];0.87[AMR][1000 genomes];0.87[EUR][1000 genomes]
rs10129612	0.80[CEU][hapmap];0.81[EUR][1000 genomes]
rs10130829	0.83[AMR][1000 genomes];0.88[EUR][1000 genomes]
rs10132022	0.81[CEU][hapmap];0.82[EUR][1000 genomes]
rs10133262	0.85[CEU][hapmap];0.85[TSI][hapmap];0.88[EUR][1000 genomes]
rs10133883	0.83[EUR][1000 genomes]
rs10136129	0.85[CEU][hapmap];0.83[AMR][1000 genomes];0.88[EUR][1000 genomes]
rs10136174	0.83[EUR][1000 genomes]
rs10136790	0.85[CEU][hapmap];0.88[EUR][1000 genomes]
rs10136868	0.82[EUR][1000 genomes]
rs10139548	0.86[AMR][1000 genomes];0.87[EUR][1000 genomes]
rs10140097	0.85[CEU][hapmap];0.81[AMR][1000 genomes];0.87[EUR][1000 genomes]
rs10140282	0.83[AMR][1000 genomes];0.88[EUR][1000 genomes]
rs10141638	1.00[JPT][hapmap]
rs10143455	0.85[CEU][hapmap];0.85[TSI][hapmap];0.81[AMR][1000 genomes];0.85[EUR][1000 genomes]
rs10143843	0.85[CEU][hapmap];0.81[AMR][1000 genomes];0.88[EUR][1000 genomes]
rs10144995	0.83[EUR][1000 genomes]
rs1033686	0.83[CEU][hapmap];1.00[GIH][hapmap];0.80[TSI][hapmap];0.83[EUR][1000 genomes]
rs1040598	1.00[CHD][hapmap];1.00[JPT][hapmap]
rs10467735	0.88[EUR][1000 genomes]
rs11158700	0.87[ASN][1000 genomes]
rs11158701	1.00[CHB][hapmap];0.87[ASN][1000 genomes]
rs11158715	0.81[EUR][1000 genomes]
rs11158716	1.00[CEU][hapmap];1.00[CHB][hapmap];1.00[JPT][hapmap];0.93[YRI][hapmap];0.96[AFR][1000 genomes];0.87[AMR][1000 genomes];0.96[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs11158718	1.00[CHB][hapmap];1.00[JPT][hapmap];0.87[ASN][1000 genomes]
rs11621019	1.00[JPT][hapmap]
rs11621638	0.88[CEU][hapmap];0.88[EUR][1000 genomes]
rs11622135	1.00[CEU][hapmap];1.00[CHB][hapmap];1.00[JPT][hapmap];0.93[YRI][hapmap];0.97[AFR][1000 genomes];1.00[AMR][1000 genomes];0.97[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs11622243	0.85[AMR][1000 genomes];0.88[EUR][1000 genomes]
rs11622787	0.85[CEU][hapmap];0.83[AMR][1000 genomes];0.87[EUR][1000 genomes]
rs11623355	0.85[CEU][hapmap];0.85[TSI][hapmap];0.83[EUR][1000 genomes]
rs11623984	0.83[EUR][1000 genomes]
rs11624484	0.84[CEU][hapmap];1.00[CHB][hapmap];1.00[JPT][hapmap];0.81[YRI][hapmap];0.85[AFR][1000 genomes];0.81[EUR][1000 genomes];0.87[ASN][1000 genomes]
rs11624609	1.00[CEU][hapmap];1.00[CHB][hapmap];1.00[YRI][hapmap];0.96[AFR][1000 genomes];0.96[AMR][1000 genomes];0.96[EUR][1000 genomes];0.88[ASN][1000 genomes]
rs11626280	0.88[EUR][1000 genomes]
rs11626332	1.00[CHB][hapmap];1.00[JPT][hapmap];0.87[ASN][1000 genomes]
rs11626769	1.00[JPT][hapmap]
rs11626809	0.93[GIH][hapmap]
rs11629073	0.85[AFR][1000 genomes];0.83[EUR][1000 genomes];0.87[ASN][1000 genomes]
rs11844529	0.85[CEU][hapmap];0.85[AMR][1000 genomes];0.88[EUR][1000 genomes]
rs11846344	0.85[CEU][hapmap];0.85[TSI][hapmap];0.85[AMR][1000 genomes];0.88[EUR][1000 genomes]
rs11848187	0.82[EUR][1000 genomes]
rs11848769	1.00[CEU][hapmap];1.00[CHB][hapmap];1.00[JPT][hapmap];1.00[YRI][hapmap];1.00[AFR][1000 genomes];1.00[AMR][1000 genomes];0.97[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs11850191	0.85[CEU][hapmap];0.85[TSI][hapmap];0.85[AMR][1000 genomes];0.88[EUR][1000 genomes]
rs11850946	1.00[CEU][hapmap];1.00[CHB][hapmap];1.00[JPT][hapmap];0.91[AMR][1000 genomes];0.99[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs11852180	0.85[CEU][hapmap];0.88[EUR][1000 genomes]
rs11852208	0.96[AFR][1000 genomes];0.96[AMR][1000 genomes];0.96[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs12100584	0.85[CEU][hapmap];0.88[EUR][1000 genomes]
rs12431490	0.87[ASN][1000 genomes]
rs12431697	0.81[CEU][hapmap];0.83[EUR][1000 genomes]
rs12432558	1.00[CHB][hapmap];1.00[CHD][hapmap];0.81[GIH][hapmap];1.00[JPT][hapmap];0.87[ASN][1000 genomes]
rs12432681	0.83[EUR][1000 genomes]
rs12433710	1.00[JPT][hapmap]
rs12433779	1.00[JPT][hapmap];0.86[ASN][1000 genomes]
rs12434751	0.87[ASN][1000 genomes]
rs12435554	1.00[CEU][hapmap];1.00[CHB][hapmap];1.00[JPT][hapmap];1.00[YRI][hapmap];1.00[AFR][1000 genomes];0.92[AMR][1000 genomes];0.97[EUR][1000 genomes];0.87[ASN][1000 genomes]
rs12436203	0.87[ASN][1000 genomes]
rs12437178	0.85[CEU][hapmap];0.85[TSI][hapmap];0.91[AMR][1000 genomes];0.87[EUR][1000 genomes]
rs12437276	0.93[AFR][1000 genomes];1.00[AMR][1000 genomes];0.97[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs12437441	1.00[JPT][hapmap]
rs12891164	1.00[CHD][hapmap];1.00[JPT][hapmap]
rs13329056	0.83[AMR][1000 genomes];0.87[EUR][1000 genomes]
rs1467673	1.00[CHD][hapmap]
rs1543391	1.00[CHD][hapmap];0.82[GIH][hapmap];1.00[JPT][hapmap]
rs17104764	0.85[CEU][hapmap];0.88[EUR][1000 genomes]
rs17104776	0.85[CEU][hapmap];0.81[EUR][1000 genomes]
rs17104800	0.80[CEU][hapmap];0.83[EUR][1000 genomes]
rs17192558	0.91[ASW][hapmap];1.00[CEU][hapmap];1.00[CHB][hapmap];1.00[CHD][hapmap];1.00[GIH][hapmap];1.00[JPT][hapmap];0.85[LWK][hapmap];1.00[MEX][hapmap];0.89[MKK][hapmap];1.00[TSI][hapmap];0.93[YRI][hapmap];0.91[AFR][1000 genomes];1.00[AMR][1000 genomes];0.99[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs17783094	1.00[JPT][hapmap]
rs17783304	1.00[CEU][hapmap];1.00[CHB][hapmap];1.00[JPT][hapmap];1.00[YRI][hapmap];1.00[AFR][1000 genomes];1.00[AMR][1000 genomes];0.99[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs1810523	1.00[CHD][hapmap];1.00[JPT][hapmap]
rs181561	1.00[JPT][hapmap]
rs181564	1.00[JPT][hapmap]
rs181565	1.00[CHD][hapmap];0.82[GIH][hapmap];1.00[JPT][hapmap]
rs181570	1.00[CHD][hapmap];0.82[GIH][hapmap];1.00[JPT][hapmap]
rs181576	1.00[JPT][hapmap]
rs1950764	0.96[GIH][hapmap]
rs1952245	1.00[CHD][hapmap]
rs1958111	1.00[CHD][hapmap]
rs1980654	0.85[CEU][hapmap];0.85[TSI][hapmap];0.83[EUR][1000 genomes]
rs1980655	0.85[CEU][hapmap];0.83[EUR][1000 genomes]
rs2009191	0.83[EUR][1000 genomes]
rs2038565	1.00[CEU][hapmap];1.00[CHB][hapmap];1.00[JPT][hapmap];0.93[YRI][hapmap];0.88[AFR][1000 genomes];0.81[AMR][1000 genomes];0.92[EUR][1000 genomes];0.87[ASN][1000 genomes]
rs2093358	0.82[EUR][1000 genomes]
rs2208596	0.85[CEU][hapmap];0.87[EUR][1000 genomes]
rs2588814	1.00[CHD][hapmap]
rs2588815	1.00[CHD][hapmap]
rs2588821	1.00[CHD][hapmap]
rs2588825	1.00[CHD][hapmap]
rs2588834	1.00[CHD][hapmap];0.82[GIH][hapmap];0.80[MKK][hapmap]
rs2767365	1.00[CHD][hapmap];0.82[GIH][hapmap]
rs2767368	0.82[GIH][hapmap]
rs28403941	0.83[AMR][1000 genomes];0.87[EUR][1000 genomes]
rs28444723	0.83[EUR][1000 genomes]
rs28470365	0.83[EUR][1000 genomes]
rs28474827	0.80[EUR][1000 genomes]
rs28474995	0.84[EUR][1000 genomes]
rs28488544	0.88[EUR][1000 genomes]
rs28509330	0.83[AMR][1000 genomes];0.88[EUR][1000 genomes]
rs28649231	0.97[AFR][1000 genomes];0.91[AMR][1000 genomes];0.81[ASN][1000 genomes]
rs28713367	0.87[ASN][1000 genomes]
rs2874133	1.00[JPT][hapmap]
rs2877369	0.85[CEU][hapmap];0.88[EUR][1000 genomes]
rs34588410	0.96[AFR][1000 genomes];0.96[AMR][1000 genomes];0.97[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs34723132	0.95[AFR][1000 genomes];0.89[AMR][1000 genomes];0.97[EUR][1000 genomes];0.87[ASN][1000 genomes]
rs34759521	0.80[ASN][1000 genomes]
rs35803514	0.86[ASN][1000 genomes]
rs4436722	0.85[CEU][hapmap];0.88[EUR][1000 genomes]
rs4902535	0.85[CEU][hapmap];0.88[EUR][1000 genomes]
rs4902536	0.85[CEU][hapmap];0.85[TSI][hapmap];0.88[EUR][1000 genomes]
rs4902538	0.85[CEU][hapmap];0.85[TSI][hapmap];0.88[EUR][1000 genomes]
rs4902539	0.88[EUR][1000 genomes]
rs4902540	0.85[CEU][hapmap];0.88[EUR][1000 genomes]
rs4902544	0.81[AMR][1000 genomes];0.87[EUR][1000 genomes]
rs57990032	0.87[EUR][1000 genomes]
rs58151429	0.83[EUR][1000 genomes]
rs60201005	0.83[AMR][1000 genomes];0.87[EUR][1000 genomes]
rs60471554	0.83[EUR][1000 genomes]
rs6573800	0.88[EUR][1000 genomes]
rs6573801	0.88[EUR][1000 genomes]
rs6573805	0.84[CEU][hapmap];0.85[AMR][1000 genomes];0.87[EUR][1000 genomes]
rs6573814	0.85[CEU][hapmap];0.83[EUR][1000 genomes]
rs7141160	1.00[CHD][hapmap];0.82[GIH][hapmap];1.00[JPT][hapmap];0.82[MKK][hapmap]
rs7141450	1.00[JPT][hapmap]
rs7142112	0.85[CEU][hapmap];0.88[EUR][1000 genomes]
rs7142210	0.85[CEU][hapmap];0.88[EUR][1000 genomes]
rs7142860	0.88[EUR][1000 genomes]
rs7143196	1.00[CHD][hapmap];1.00[JPT][hapmap]
rs7145044	1.00[CEU][hapmap];1.00[CHB][hapmap];1.00[JPT][hapmap];1.00[YRI][hapmap];0.95[AFR][1000 genomes];0.92[AMR][1000 genomes];0.97[EUR][1000 genomes];0.87[ASN][1000 genomes]
rs7145771	0.86[EUR][1000 genomes]
rs7146354	0.85[CEU][hapmap];0.88[EUR][1000 genomes]
rs7149482	1.00[CHD][hapmap];0.82[GIH][hapmap];1.00[JPT][hapmap]
rs7150705	1.00[CHB][hapmap];1.00[JPT][hapmap];0.87[ASN][1000 genomes]
rs7150903	1.00[CHB][hapmap];1.00[JPT][hapmap];0.87[ASN][1000 genomes]
rs7151495	1.00[CHB][hapmap];1.00[JPT][hapmap];0.87[ASN][1000 genomes]
rs7151917	1.00[AFR][1000 genomes];0.92[AMR][1000 genomes];0.97[EUR][1000 genomes];0.87[ASN][1000 genomes]
rs7154014	0.88[AFR][1000 genomes];0.81[AMR][1000 genomes];0.92[EUR][1000 genomes];0.87[ASN][1000 genomes]
rs7154646	0.85[CEU][hapmap];0.85[TSI][hapmap];0.85[AMR][1000 genomes];0.88[EUR][1000 genomes]
rs7155097	0.85[CEU][hapmap];0.85[AMR][1000 genomes];0.87[EUR][1000 genomes]
rs7155840	0.80[CEU][hapmap];0.83[EUR][1000 genomes]
rs7155985	1.00[AFR][1000 genomes];0.92[AMR][1000 genomes];0.97[EUR][1000 genomes];0.87[ASN][1000 genomes]
rs7157185	0.85[CEU][hapmap];0.85[AMR][1000 genomes];0.88[EUR][1000 genomes]
rs7158544	0.85[CEU][hapmap];0.84[AMR][1000 genomes];0.87[EUR][1000 genomes]
rs7159622	1.00[JPT][hapmap]
rs7160115	1.00[CEU][hapmap];1.00[CHB][hapmap];0.88[EUR][1000 genomes]
rs7161069	0.83[EUR][1000 genomes]
rs72725127	0.87[ASN][1000 genomes]
rs72725138	0.88[EUR][1000 genomes]
rs72725141	1.00[AFR][1000 genomes];0.92[AMR][1000 genomes];0.97[EUR][1000 genomes];0.87[ASN][1000 genomes]
rs72725149	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes];0.99[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs72725151	0.97[AFR][1000 genomes];1.00[AMR][1000 genomes];0.97[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs72725153	0.96[AFR][1000 genomes];1.00[AMR][1000 genomes];0.97[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs72725154	0.88[EUR][1000 genomes]
rs72725156	0.92[AMR][1000 genomes];0.93[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs72725157	0.96[AFR][1000 genomes];1.00[AMR][1000 genomes];0.97[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs72725158	0.88[EUR][1000 genomes]
rs72725159	0.92[AMR][1000 genomes];0.93[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs72725160	0.88[EUR][1000 genomes]
rs72725163	0.88[EUR][1000 genomes]
rs72725165	0.96[AFR][1000 genomes];0.96[AMR][1000 genomes];0.96[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs72725168	0.96[AFR][1000 genomes];0.85[AMR][1000 genomes];0.97[EUR][1000 genomes];0.87[ASN][1000 genomes]
rs72725170	0.96[AFR][1000 genomes];0.85[AMR][1000 genomes];0.97[EUR][1000 genomes];0.87[ASN][1000 genomes]
rs72725172	0.88[AFR][1000 genomes];0.81[AMR][1000 genomes];0.92[EUR][1000 genomes];0.87[ASN][1000 genomes]
rs72725173	0.83[EUR][1000 genomes]
rs72725174	0.88[EUR][1000 genomes];0.81[ASN][1000 genomes]
rs72725183	0.87[ASN][1000 genomes]
rs72725185	0.85[AFR][1000 genomes];0.80[EUR][1000 genomes];0.87[ASN][1000 genomes]
rs72725186	0.87[ASN][1000 genomes]
rs72725187	0.85[AFR][1000 genomes];0.80[EUR][1000 genomes];0.87[ASN][1000 genomes]
rs72725188	0.85[AFR][1000 genomes];0.80[EUR][1000 genomes];0.87[ASN][1000 genomes]
rs764088	0.87[ASN][1000 genomes]
rs8006437	0.88[EUR][1000 genomes]
rs8006492	0.83[EUR][1000 genomes]
rs8013677	0.83[CEU][hapmap];0.88[EUR][1000 genomes]
rs8015128	1.00[CEU][hapmap];1.00[CHB][hapmap];1.00[JPT][hapmap];0.93[YRI][hapmap];0.88[AFR][1000 genomes];0.81[AMR][1000 genomes];0.92[EUR][1000 genomes];0.87[ASN][1000 genomes]
rs8016525	0.85[CEU][hapmap];0.88[EUR][1000 genomes]
rs8020795	0.85[CEU][hapmap];0.85[TSI][hapmap];0.87[AMR][1000 genomes];0.86[EUR][1000 genomes]
rs8021404	1.00[CEU][hapmap];1.00[CHB][hapmap];1.00[JPT][hapmap];0.93[YRI][hapmap];0.87[AFR][1000 genomes];0.81[AMR][1000 genomes];0.92[EUR][1000 genomes];0.87[ASN][1000 genomes]
rs8022206	1.00[CEU][hapmap];1.00[CHB][hapmap];1.00[CHD][hapmap];1.00[JPT][hapmap];0.97[LWK][hapmap];1.00[YRI][hapmap];0.87[AFR][1000 genomes];0.81[AMR][1000 genomes];0.92[EUR][1000 genomes];0.87[ASN][1000 genomes]
rs9323501	0.81[CEU][hapmap];0.83[EUR][1000 genomes]
rs9672142	0.84[CEU][hapmap];0.91[AMR][1000 genomes];0.87[EUR][1000 genomes]

rSNP related genes

Symbol	Regulation type
RAD51B	RNA binding protein mediated regulation

rSNP related regulatory elements

Proximal transcriptional regulation

Distal transcriptional regulation

Post-transcriptional regulation:within mature miRNA

Post-transcriptional regulation: associated with RNA binding protein

eQTL evidence (count: 1)