SNP Report

Basic Infomation

Name	rs11621638 dbSNP
Location	chr:14,68500427
Allele	C/T

LD-proxy of rSNPs(r²>0.8) (count: 70)

The LD data used here is based on HapMap rel#27 and 1000 Genomes phase I data. LD SNP pairs were selected with a threshold r² >=0.8.

rs_ID	r²[population][source]
rs10129355	0.80[EUR][1000 genomes]
rs10140097	0.80[EUR][1000 genomes]
rs1033686	1.00[CEU][hapmap];1.00[CHB][hapmap];1.00[AFR][1000 genomes];0.90[EUR][1000 genomes]
rs11158716	0.89[CEU][hapmap];0.88[EUR][1000 genomes]
rs11622135	0.89[CEU][hapmap];0.90[EUR][1000 genomes]
rs11622787	0.80[EUR][1000 genomes]
rs11624609	0.89[CEU][hapmap];0.89[EUR][1000 genomes]
rs11848187	0.81[EUR][1000 genomes]
rs11848769	0.88[CEU][hapmap];0.90[EUR][1000 genomes]
rs11850946	0.89[CEU][hapmap];0.89[EUR][1000 genomes]
rs11852208	0.89[EUR][1000 genomes]
rs12435554	0.89[CEU][hapmap];0.87[EUR][1000 genomes]
rs12437178	0.80[EUR][1000 genomes]
rs12437276	0.90[EUR][1000 genomes]
rs1274639	1.00[CHB][hapmap]
rs1314911	1.00[CHB][hapmap];1.00[ASN][1000 genomes]
rs1314916	1.00[ASN][1000 genomes]
rs13329056	0.80[EUR][1000 genomes]
rs17192558	0.88[CEU][hapmap];0.89[EUR][1000 genomes]
rs17192586	0.88[CEU][hapmap];0.88[EUR][1000 genomes]
rs17783304	0.89[CEU][hapmap];0.89[EUR][1000 genomes]
rs1950764	1.00[CHB][hapmap]
rs1952246	0.81[CEU][hapmap];1.00[CHB][hapmap];1.00[ASN][1000 genomes]
rs1958115	0.82[CEU][hapmap];1.00[CHB][hapmap];1.00[ASN][1000 genomes]
rs2038565	0.89[CEU][hapmap];0.85[EUR][1000 genomes]
rs2038979	0.82[CEU][hapmap]
rs2208596	0.80[EUR][1000 genomes]
rs2588807	0.81[CEU][hapmap]
rs2588814	0.81[CEU][hapmap]
rs2588819	0.81[CEU][hapmap]
rs2588823	0.82[CEU][hapmap]
rs2588827	0.81[CEU][hapmap];1.00[CHB][hapmap];1.00[ASN][1000 genomes]
rs2767368	0.81[CEU][hapmap];1.00[CHB][hapmap];1.00[ASN][1000 genomes]
rs2767382	1.00[ASN][1000 genomes]
rs28403941	0.80[EUR][1000 genomes]
rs34558039	1.00[AFR][1000 genomes];0.83[AMR][1000 genomes];0.81[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs34588410	0.90[EUR][1000 genomes]
rs34723132	0.87[EUR][1000 genomes]
rs4902544	0.80[EUR][1000 genomes]
rs57990032	0.80[EUR][1000 genomes]
rs60201005	0.80[EUR][1000 genomes]
rs6573805	0.80[EUR][1000 genomes]
rs7145044	0.94[CEU][hapmap];0.87[EUR][1000 genomes]
rs7151917	0.87[EUR][1000 genomes]
rs7154014	0.85[EUR][1000 genomes]
rs7155985	0.87[EUR][1000 genomes]
rs7158544	0.80[EUR][1000 genomes]
rs7160115	0.89[CEU][hapmap]
rs72725138	1.00[AFR][1000 genomes];0.86[AMR][1000 genomes];0.96[EUR][1000 genomes]
rs72725141	0.87[EUR][1000 genomes]
rs72725149	0.89[EUR][1000 genomes]
rs72725151	0.90[EUR][1000 genomes]
rs72725153	0.90[EUR][1000 genomes]
rs72725154	0.81[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs72725156	0.94[EUR][1000 genomes]
rs72725157	0.90[EUR][1000 genomes]
rs72725158	1.00[AFR][1000 genomes];0.81[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs72725159	0.94[EUR][1000 genomes]
rs72725160	1.00[AFR][1000 genomes];0.81[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs72725163	1.00[AFR][1000 genomes];0.86[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs72725165	0.89[EUR][1000 genomes]
rs72725168	0.90[EUR][1000 genomes]
rs72725170	0.90[EUR][1000 genomes]
rs72725172	0.85[EUR][1000 genomes]
rs72725173	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes];0.94[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs72725174	0.89[EUR][1000 genomes]
rs8015128	0.89[CEU][hapmap];0.85[EUR][1000 genomes]
rs8021404	0.89[CEU][hapmap];0.85[EUR][1000 genomes]
rs8022206	0.87[CEU][hapmap];0.85[EUR][1000 genomes]
rs9672142	0.80[EUR][1000 genomes]

rSNP related genes

Symbol	Regulation type
RAD51B	RNA binding protein mediated regulation

rSNP related regulatory elements

Proximal transcriptional regulation

Distal transcriptional regulation

Post-transcriptional regulation:within mature miRNA

Post-transcriptional regulation: associated with RNA binding protein

eQTL evidence (count: 0)