SNP Report

Basic Infomation

Name	rs7143196 dbSNP
Location	chr:14,68257485
Allele	C/T

LD-proxy of rSNPs(r²>0.8) (count: 62)

The LD data used here is based on HapMap rel#27 and 1000 Genomes phase I data. LD SNP pairs were selected with a threshold r² >=0.8.

rs_ID	r²[population][source]
rs10135927	0.87[ASN][1000 genomes]
rs10141638	1.00[CHB][hapmap];1.00[JPT][hapmap];0.87[ASN][1000 genomes]
rs10150007	1.00[ASN][1000 genomes]
rs1040598	1.00[CHB][hapmap];1.00[CHD][hapmap];1.00[JPT][hapmap];1.00[ASN][1000 genomes]
rs11158694	1.00[CHB][hapmap];1.00[JPT][hapmap];1.00[ASN][1000 genomes]
rs11621019	1.00[CHB][hapmap];1.00[JPT][hapmap];1.00[ASN][1000 genomes]
rs11621258	1.00[JPT][hapmap]
rs11626332	1.00[JPT][hapmap]
rs11626590	1.00[ASN][1000 genomes]
rs11626769	1.00[CHB][hapmap];1.00[JPT][hapmap];1.00[ASN][1000 genomes]
rs12432558	1.00[CHD][hapmap];1.00[JPT][hapmap]
rs12433710	1.00[CHB][hapmap];1.00[JPT][hapmap];1.00[ASN][1000 genomes]
rs12433779	1.00[CHB][hapmap];1.00[JPT][hapmap]
rs12435554	1.00[JPT][hapmap]
rs12891164	1.00[CHD][hapmap];1.00[JPT][hapmap];1.00[ASN][1000 genomes]
rs12893157	1.00[CHB][hapmap];1.00[JPT][hapmap];1.00[ASN][1000 genomes]
rs1543391	1.00[CHB][hapmap];1.00[CHD][hapmap];1.00[JPT][hapmap];1.00[ASN][1000 genomes]
rs17192558	1.00[CHD][hapmap];1.00[JPT][hapmap]
rs17192586	1.00[CHD][hapmap];1.00[JPT][hapmap]
rs17783094	1.00[CHB][hapmap];1.00[JPT][hapmap];1.00[ASN][1000 genomes]
rs17783214	1.00[ASW][hapmap]
rs17783304	1.00[JPT][hapmap]
rs1810523	1.00[CHB][hapmap];1.00[CHD][hapmap];1.00[JPT][hapmap];1.00[ASN][1000 genomes]
rs181561	1.00[CHB][hapmap];1.00[JPT][hapmap];1.00[ASN][1000 genomes]
rs181562	1.00[ASN][1000 genomes]
rs181564	1.00[CHB][hapmap];1.00[JPT][hapmap];1.00[ASN][1000 genomes]
rs181565	1.00[CHB][hapmap];1.00[CHD][hapmap];1.00[JPT][hapmap];1.00[ASN][1000 genomes]
rs181567	1.00[ASN][1000 genomes]
rs181570	1.00[CHB][hapmap];1.00[CHD][hapmap];1.00[JPT][hapmap];1.00[ASN][1000 genomes]
rs181574	1.00[ASN][1000 genomes]
rs181576	1.00[CHB][hapmap];1.00[JPT][hapmap];1.00[ASN][1000 genomes]
rs1964828	1.00[ASN][1000 genomes]
rs2235967	1.00[CHB][hapmap];1.00[CHD][hapmap];1.00[JPT][hapmap];1.00[ASN][1000 genomes]
rs2295105	0.80[ASN][1000 genomes]
rs2295106	1.00[CHB][hapmap];1.00[JPT][hapmap];0.83[ASN][1000 genomes]
rs2295107	1.00[CHB][hapmap];1.00[CHD][hapmap];1.00[JPT][hapmap];1.00[ASN][1000 genomes]
rs2874132	1.00[CHB][hapmap];1.00[CHD][hapmap];1.00[JPT][hapmap];1.00[ASN][1000 genomes]
rs2874133	1.00[JPT][hapmap]
rs34759521	0.80[ASN][1000 genomes]
rs35272075	0.87[ASN][1000 genomes]
rs3742879	1.00[JPT][hapmap]
rs4143685	1.00[CHB][hapmap];1.00[JPT][hapmap];1.00[ASN][1000 genomes]
rs4284565	1.00[ASN][1000 genomes]
rs55854324	0.84[AFR][1000 genomes];0.92[AMR][1000 genomes];0.81[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs55867043	0.84[AFR][1000 genomes];0.92[AMR][1000 genomes];0.81[EUR][1000 genomes];0.87[ASN][1000 genomes]
rs7142433	1.00[CHB][hapmap];1.00[ASN][1000 genomes]
rs7143496	1.00[CHB][hapmap];1.00[CHD][hapmap];1.00[JPT][hapmap];1.00[ASN][1000 genomes]
rs7145044	1.00[JPT][hapmap]
rs7149482	1.00[CHB][hapmap];1.00[CHD][hapmap];1.00[JPT][hapmap];1.00[ASN][1000 genomes]
rs7150705	1.00[JPT][hapmap]
rs7150903	1.00[JPT][hapmap]
rs7151495	1.00[JPT][hapmap]
rs7159622	1.00[CHB][hapmap];1.00[JPT][hapmap];1.00[ASN][1000 genomes]
rs7159982	1.00[ASN][1000 genomes]
rs72723196	1.00[ASN][1000 genomes]
rs72723202	0.84[AFR][1000 genomes];0.92[AMR][1000 genomes];0.81[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs72725103	1.00[ASN][1000 genomes]
rs72725114	0.87[ASN][1000 genomes]
rs8004611	1.00[ASN][1000 genomes]
rs8011120	1.00[CHB][hapmap];1.00[ASN][1000 genomes]
rs8012974	1.00[ASN][1000 genomes]
rs932554	0.85[MEX][hapmap]

rSNP related genes

Symbol	Regulation type
ZFYVE26	Proximal transcriptional regulation
ZFYVE26	RNA binding protein mediated regulation

rSNP related regulatory elements

Proximal transcriptional regulation

Distal transcriptional regulation

Post-transcriptional regulation:within mature miRNA

Post-transcriptional regulation: associated with RNA binding protein

eQTL evidence (count: 1)