SNP Report

Basic Infomation

Name	rs28649231 dbSNP
Location	chr:14,68423215
Allele	G/A

LD-proxy of rSNPs(r²>0.8) (count: 72)

The LD data used here is based on HapMap rel#27 and 1000 Genomes phase I data. LD SNP pairs were selected with a threshold r² >=0.8.

rs_ID	r²[population][source]
rs10133262	0.83[AMR][1000 genomes]
rs10136790	0.83[AMR][1000 genomes]
rs11158700	0.81[ASN][1000 genomes]
rs11158701	0.81[ASN][1000 genomes]
rs11158716	0.94[AFR][1000 genomes];0.92[AMR][1000 genomes];0.81[ASN][1000 genomes]
rs11622135	0.95[AFR][1000 genomes];0.91[AMR][1000 genomes];0.81[ASN][1000 genomes]
rs11624484	0.83[AFR][1000 genomes]
rs11624609	0.94[AFR][1000 genomes];0.87[AMR][1000 genomes]
rs11626280	0.81[AMR][1000 genomes]
rs11626332	0.81[ASN][1000 genomes]
rs11629073	0.83[AFR][1000 genomes]
rs11848769	0.97[AFR][1000 genomes];0.91[AMR][1000 genomes];0.81[ASN][1000 genomes]
rs11850946	0.82[AMR][1000 genomes];0.81[EUR][1000 genomes];0.81[ASN][1000 genomes]
rs11852180	0.83[AMR][1000 genomes]
rs11852208	0.94[AFR][1000 genomes];0.87[AMR][1000 genomes];0.81[ASN][1000 genomes]
rs12431490	0.81[ASN][1000 genomes]
rs12432558	0.81[ASN][1000 genomes]
rs12433779	0.81[ASN][1000 genomes]
rs12434751	0.81[ASN][1000 genomes]
rs12435554	0.97[AFR][1000 genomes];0.98[AMR][1000 genomes];0.82[EUR][1000 genomes];0.94[ASN][1000 genomes]
rs12437178	0.82[AMR][1000 genomes]
rs12437276	0.91[AFR][1000 genomes];0.91[AMR][1000 genomes];0.81[ASN][1000 genomes]
rs17192558	0.89[AFR][1000 genomes];0.91[AMR][1000 genomes];0.81[EUR][1000 genomes];0.81[ASN][1000 genomes]
rs17192586	0.97[AFR][1000 genomes];0.91[AMR][1000 genomes];0.81[ASN][1000 genomes]
rs17783304	0.97[AFR][1000 genomes];0.91[AMR][1000 genomes];0.81[EUR][1000 genomes];0.81[ASN][1000 genomes]
rs2038565	0.86[AFR][1000 genomes];0.87[AMR][1000 genomes]
rs28488544	0.83[AMR][1000 genomes]
rs28713367	0.81[ASN][1000 genomes]
rs34588410	0.94[AFR][1000 genomes];0.87[AMR][1000 genomes];0.81[ASN][1000 genomes]
rs34723132	0.92[AFR][1000 genomes];0.94[AMR][1000 genomes];0.82[EUR][1000 genomes];0.94[ASN][1000 genomes]
rs35803514	0.81[ASN][1000 genomes]
rs4902538	0.82[AMR][1000 genomes]
rs4902539	0.83[AMR][1000 genomes]
rs4902540	0.83[AMR][1000 genomes]
rs6573800	0.84[AMR][1000 genomes]
rs6573801	0.83[AMR][1000 genomes]
rs7142112	0.83[AMR][1000 genomes]
rs7142210	0.83[AMR][1000 genomes]
rs7142860	0.80[AMR][1000 genomes]
rs7145044	0.92[AFR][1000 genomes];0.98[AMR][1000 genomes];0.82[EUR][1000 genomes];0.94[ASN][1000 genomes]
rs7145771	0.83[AMR][1000 genomes]
rs7146354	0.83[AMR][1000 genomes]
rs7150705	0.81[ASN][1000 genomes]
rs7150903	0.81[ASN][1000 genomes]
rs7151495	0.81[ASN][1000 genomes]
rs7151917	0.97[AFR][1000 genomes];0.98[AMR][1000 genomes];0.82[EUR][1000 genomes];0.94[ASN][1000 genomes]
rs7154014	0.86[AFR][1000 genomes];0.87[AMR][1000 genomes]
rs7155985	0.97[AFR][1000 genomes];0.98[AMR][1000 genomes];0.82[EUR][1000 genomes];0.94[ASN][1000 genomes]
rs7160115	0.83[AMR][1000 genomes]
rs72725127	0.81[ASN][1000 genomes]
rs72725141	0.97[AFR][1000 genomes];0.98[AMR][1000 genomes];0.82[EUR][1000 genomes];0.94[ASN][1000 genomes]
rs72725149	0.97[AFR][1000 genomes];0.91[AMR][1000 genomes];0.81[EUR][1000 genomes];0.81[ASN][1000 genomes]
rs72725151	0.95[AFR][1000 genomes];0.91[AMR][1000 genomes];0.81[ASN][1000 genomes]
rs72725153	0.94[AFR][1000 genomes];0.91[AMR][1000 genomes];0.81[ASN][1000 genomes]
rs72725156	0.83[AMR][1000 genomes];0.81[ASN][1000 genomes]
rs72725157	0.94[AFR][1000 genomes];0.91[AMR][1000 genomes];0.81[ASN][1000 genomes]
rs72725159	0.83[AMR][1000 genomes];0.81[ASN][1000 genomes]
rs72725165	0.94[AFR][1000 genomes];0.87[AMR][1000 genomes];0.81[ASN][1000 genomes]
rs72725168	0.94[AFR][1000 genomes];0.91[AMR][1000 genomes]
rs72725170	0.94[AFR][1000 genomes];0.91[AMR][1000 genomes]
rs72725172	0.86[AFR][1000 genomes];0.87[AMR][1000 genomes]
rs72725174	0.81[AMR][1000 genomes]
rs72725185	0.83[AFR][1000 genomes]
rs72725187	0.83[AFR][1000 genomes]
rs72725188	0.83[AFR][1000 genomes]
rs764088	0.81[ASN][1000 genomes]
rs8013677	0.83[AMR][1000 genomes]
rs8015128	0.86[AFR][1000 genomes];0.87[AMR][1000 genomes]
rs8016525	0.83[AMR][1000 genomes]
rs8021404	0.85[AFR][1000 genomes];0.87[AMR][1000 genomes]
rs8022206	0.85[AFR][1000 genomes];0.87[AMR][1000 genomes]
rs9672142	0.82[AMR][1000 genomes]

rSNP related genes

Symbol	Regulation type
ZFP36L1	Distal transcriptional regulation
RAD51B	RNA binding protein mediated regulation

rSNP related regulatory elements

Proximal transcriptional regulation

Distal transcriptional regulation

Post-transcriptional regulation:within mature miRNA

Post-transcriptional regulation: associated with RNA binding protein

eQTL evidence (count: 0)