SNP Report
Basic Infomation
| Name | rs11626809 dbSNP |
|---|---|
| Location | chr:14,68298812 |
| Allele | G/T |
LD-proxy of rSNPs(r2>0.8) (count: 22)
The LD data used here is based on HapMap rel#27 and 1000 Genomes phase I data. LD SNP pairs were selected with a threshold r2 >=0.8.
| rs_ID | r2[population][source] |
|---|---|
| rs1033686 | 1.00[ASW][hapmap];0.93[GIH][hapmap];0.81[EUR][1000 genomes] |
| rs1040598 | 0.85[GIH][hapmap] |
| rs11621682 | 1.00[AFR][1000 genomes];1.00[AMR][1000 genomes];0.94[EUR][1000 genomes] |
| rs12878157 | 1.00[ASW][hapmap];1.00[AFR][1000 genomes] |
| rs12881114 | 1.00[ASW][hapmap] |
| rs12891164 | 0.85[GIH][hapmap] |
| rs1543391 | 0.89[GIH][hapmap] |
| rs17192558 | 0.93[GIH][hapmap] |
| rs17192586 | 0.93[GIH][hapmap] |
| rs1810523 | 0.85[GIH][hapmap] |
| rs181564 | 0.83[GIH][hapmap] |
| rs181565 | 0.89[GIH][hapmap] |
| rs181570 | 0.89[GIH][hapmap] |
| rs1950764 | 1.00[ASW][hapmap];0.89[GIH][hapmap] |
| rs2235967 | 0.85[GIH][hapmap] |
| rs2295107 | 0.85[GIH][hapmap] |
| rs2874132 | 0.85[GIH][hapmap] |
| rs7143496 | 0.85[GIH][hapmap] |
| rs7149482 | 0.89[GIH][hapmap] |
| rs72725106 | 1.00[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes] |
| rs72725112 | 1.00[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes] |
| rs7410 | 1.00[ASW][hapmap] |
rSNP related genes
| Symbol | Regulation type |
|---|---|
| RAD51B | RNA binding protein mediated regulation |
rSNP related regulatory elements
Proximal transcriptional regulation
Distal transcriptional regulation
Post-transcriptional regulation:within mature miRNA
Post-transcriptional regulation: associated with RNA binding protein
eQTL evidence (count: 0)
Copyright: Bioinformatics Lab, Institute of Psychology, Chinese Academy of Sciences Feedback
Last update: March 26, 2014