SNP Report

Basic Infomation

LD-proxy of rSNPs(r²>0.8) (count: 18)

The LD data used here is based on HapMap rel#27 and 1000 Genomes phase I data. LD SNP pairs were selected with a threshold r² >=0.8.

rs_ID	r²[population][source]
rs1033686	1.00[ASW][hapmap];1.00[LWK][hapmap]
rs11621682	1.00[AFR][1000 genomes]
rs11626809	1.00[ASW][hapmap];1.00[AFR][1000 genomes]
rs12880908	0.86[CEU][hapmap];1.00[GIH][hapmap];0.88[MEX][hapmap];0.89[TSI][hapmap];0.85[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs12881114	1.00[ASW][hapmap];1.00[ASN][1000 genomes]
rs17782871	1.00[CEU][hapmap];0.94[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs1950764	1.00[ASW][hapmap];1.00[LWK][hapmap]
rs34157082	0.88[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs34186579	0.97[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs34666247	0.83[AMR][1000 genomes];0.99[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs35103502	0.94[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs3809389	1.00[ASW][hapmap]
rs67583198	0.83[AMR][1000 genomes];0.99[EUR][1000 genomes]
rs71421388	0.94[AMR][1000 genomes];0.99[EUR][1000 genomes]
rs72725106	1.00[AFR][1000 genomes]
rs72725112	1.00[AFR][1000 genomes]
rs7410	1.00[ASW][hapmap];1.00[ASN][1000 genomes]
rs749269	1.00[ASW][hapmap]

rSNP related genes

Symbol	Regulation type
ZFYVE26	Distal transcriptional regulation
ZFYVE26	RNA binding protein mediated regulation

rSNP related regulatory elements

eQTL evidence (count: 1)