SNP Report

Basic Infomation

Name	rs11158719 dbSNP
Location	chr:14,68551273
Allele	A/G

LD-proxy of rSNPs(r²>0.8) (count: 174)

The LD data used here is based on HapMap rel#27 and 1000 Genomes phase I data. LD SNP pairs were selected with a threshold r² >=0.8.

rs_ID	r²[population][source]
rs10129355	0.85[CEU][hapmap];0.90[CHB][hapmap];1.00[JPT][hapmap];0.89[YRI][hapmap];0.86[AFR][1000 genomes];0.82[EUR][1000 genomes];0.81[ASN][1000 genomes]
rs10129612	0.85[CEU][hapmap];0.90[CHB][hapmap];1.00[JPT][hapmap];0.81[ASN][1000 genomes]
rs10130829	0.81[EUR][1000 genomes]
rs10132022	0.81[CEU][hapmap];0.90[CHB][hapmap];1.00[CHD][hapmap];0.97[GIH][hapmap];1.00[JPT][hapmap];0.84[MEX][hapmap];0.85[TSI][hapmap];0.84[ASN][1000 genomes]
rs10133262	0.85[CEU][hapmap];0.90[CHB][hapmap];1.00[CHD][hapmap];0.97[GIH][hapmap];0.91[JPT][hapmap];0.91[MEX][hapmap];0.91[TSI][hapmap]
rs10133652	0.93[CHD][hapmap]
rs10133883	0.93[AFR][1000 genomes];0.87[AMR][1000 genomes];0.87[EUR][1000 genomes];0.94[ASN][1000 genomes]
rs10134124	0.81[JPT][hapmap]
rs10134664	0.81[JPT][hapmap]
rs10135046	0.81[JPT][hapmap]
rs10135256	0.81[JPT][hapmap]
rs10135925	0.93[CHD][hapmap]
rs10136129	0.85[CEU][hapmap];0.90[CHB][hapmap];0.90[JPT][hapmap];0.81[EUR][1000 genomes]
rs10136790	0.85[CEU][hapmap];0.90[CHB][hapmap];0.91[JPT][hapmap]
rs10136868	0.81[AMR][1000 genomes];0.85[EUR][1000 genomes];0.94[ASN][1000 genomes]
rs10137233	0.96[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs10139236	1.00[CEU][hapmap];1.00[CHB][hapmap];1.00[JPT][hapmap];0.96[YRI][hapmap];1.00[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs10139386	1.00[CEU][hapmap];1.00[CHB][hapmap];1.00[JPT][hapmap];0.96[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs10139548	0.85[AFR][1000 genomes]
rs10140097	0.85[CEU][hapmap];0.82[EUR][1000 genomes];0.81[ASN][1000 genomes]
rs10140282	0.81[EUR][1000 genomes]
rs10140420	0.96[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs10140493	0.96[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs10143455	0.85[CEU][hapmap];0.90[CHB][hapmap];1.00[CHD][hapmap];0.97[GIH][hapmap];1.00[JPT][hapmap];0.91[MEX][hapmap];0.91[TSI][hapmap];0.81[EUR][1000 genomes];0.81[ASN][1000 genomes]
rs10143843	0.85[CEU][hapmap];0.90[CHB][hapmap];0.91[JPT][hapmap];0.81[EUR][1000 genomes]
rs10144128	0.93[CHD][hapmap]
rs10144224	0.81[JPT][hapmap]
rs10145197	0.81[JPT][hapmap]
rs10147311	0.88[JPT][hapmap]
rs10148527	0.90[CHB][hapmap];0.91[JPT][hapmap]
rs1015023	0.81[GIH][hapmap]
rs10150584	0.81[JPT][hapmap]
rs10151115	0.96[AMR][1000 genomes];0.95[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs1080956	0.96[AMR][1000 genomes];0.95[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs1080957	1.00[CEU][hapmap];0.96[AMR][1000 genomes];0.95[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs1080958	1.00[CEU][hapmap];1.00[CHB][hapmap];1.00[JPT][hapmap];0.96[AMR][1000 genomes];0.95[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs11158710	0.93[CHD][hapmap]
rs11158715	0.90[CHB][hapmap];0.91[JPT][hapmap];0.81[ASN][1000 genomes]
rs11158717	0.82[EUR][1000 genomes];0.94[ASN][1000 genomes]
rs11158718	0.83[AMR][1000 genomes];0.85[EUR][1000 genomes]
rs11158720	0.93[CHD][hapmap];0.81[JPT][hapmap]
rs11158721	0.93[CHD][hapmap];0.81[JPT][hapmap]
rs11622243	0.81[EUR][1000 genomes]
rs11622787	0.84[CEU][hapmap];0.90[CHB][hapmap];1.00[JPT][hapmap];0.82[EUR][1000 genomes]
rs11623355	0.85[CEU][hapmap];0.90[CHB][hapmap];1.00[CHD][hapmap];0.97[GIH][hapmap];1.00[JPT][hapmap];0.91[MEX][hapmap];0.91[TSI][hapmap];0.81[AMR][1000 genomes];0.87[EUR][1000 genomes];0.94[ASN][1000 genomes]
rs11623467	0.95[CEU][hapmap];1.00[CHB][hapmap];1.00[CHD][hapmap];1.00[GIH][hapmap];1.00[JPT][hapmap];0.91[MEX][hapmap];0.97[TSI][hapmap];0.89[AMR][1000 genomes];0.96[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs11623984	0.86[AMR][1000 genomes];0.87[EUR][1000 genomes];0.94[ASN][1000 genomes]
rs11624209	0.97[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs11624484	0.85[CEU][hapmap];0.91[AMR][1000 genomes];0.88[EUR][1000 genomes]
rs11626594	0.81[GIH][hapmap]
rs11628745	0.96[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs11629073	0.91[AMR][1000 genomes];0.85[EUR][1000 genomes]
rs11844529	0.85[CEU][hapmap];0.90[CHB][hapmap];0.91[JPT][hapmap];0.81[EUR][1000 genomes]
rs11844842	0.81[JPT][hapmap]
rs11846344	0.85[CEU][hapmap];0.90[CHB][hapmap];1.00[CHD][hapmap];0.97[GIH][hapmap];0.91[JPT][hapmap];0.91[MEX][hapmap];0.91[TSI][hapmap];0.81[EUR][1000 genomes]
rs11847339	0.81[JPT][hapmap]
rs11848187	0.84[AMR][1000 genomes];0.82[EUR][1000 genomes];0.89[ASN][1000 genomes]
rs11850191	0.85[CEU][hapmap];0.90[CHB][hapmap];1.00[CHD][hapmap];0.97[GIH][hapmap];0.91[JPT][hapmap];0.91[MEX][hapmap];0.91[TSI][hapmap];0.81[EUR][1000 genomes]
rs11851991	0.81[JPT][hapmap]
rs11852180	0.85[CEU][hapmap];0.90[CHB][hapmap];0.91[JPT][hapmap];0.81[EUR][1000 genomes]
rs12100584	0.84[CEU][hapmap];0.90[CHB][hapmap];0.90[JPT][hapmap]
rs12431697	0.81[CEU][hapmap];0.90[CHB][hapmap];1.00[CHD][hapmap];0.97[GIH][hapmap];0.91[JPT][hapmap];0.84[MEX][hapmap];0.85[TSI][hapmap]
rs12432681	0.81[AMR][1000 genomes];0.87[EUR][1000 genomes];0.94[ASN][1000 genomes]
rs12436203	0.83[AMR][1000 genomes];0.81[EUR][1000 genomes]
rs12437043	0.86[CHB][hapmap];0.89[JPT][hapmap];0.87[ASN][1000 genomes]
rs12437178	1.00[ASW][hapmap];0.85[CEU][hapmap];0.90[CHB][hapmap];1.00[CHD][hapmap];0.97[GIH][hapmap];1.00[JPT][hapmap];0.87[LWK][hapmap];0.91[MEX][hapmap];0.86[MKK][hapmap];0.91[TSI][hapmap];0.89[YRI][hapmap];0.86[AFR][1000 genomes];0.82[EUR][1000 genomes]
rs13329056	0.90[CHB][hapmap];1.00[JPT][hapmap];0.82[EUR][1000 genomes]
rs1548264	1.00[CEU][hapmap];1.00[CHB][hapmap];1.00[JPT][hapmap];0.93[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs1548265	1.00[CEU][hapmap];1.00[CHB][hapmap];1.00[JPT][hapmap];0.96[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs17104764	0.85[CEU][hapmap];0.90[CHB][hapmap];0.91[JPT][hapmap]
rs17104776	0.85[CEU][hapmap];0.90[CHB][hapmap];0.91[JPT][hapmap]
rs17104786	0.93[CHD][hapmap]
rs17104796	0.93[CHD][hapmap]
rs17104800	0.80[CEU][hapmap];0.90[CHB][hapmap];0.91[JPT][hapmap]
rs17104823	0.93[CHD][hapmap]
rs17104862	0.81[JPT][hapmap]
rs17104863	0.93[CHD][hapmap];0.81[JPT][hapmap]
rs17104880	0.81[JPT][hapmap]
rs17104889	1.00[CEU][hapmap];1.00[CHB][hapmap];1.00[CHD][hapmap];1.00[GIH][hapmap];1.00[JPT][hapmap];1.00[MEX][hapmap];0.84[MKK][hapmap];1.00[TSI][hapmap];0.96[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs17104900	0.81[JPT][hapmap]
rs17104908	0.93[CHD][hapmap];1.00[JPT][hapmap];0.84[MEX][hapmap];0.86[ASN][1000 genomes]
rs17104917	0.93[CHD][hapmap];0.81[JPT][hapmap]
rs17104947	0.81[JPT][hapmap]
rs17104992	0.81[JPT][hapmap]
rs17105001	0.81[JPT][hapmap]
rs17783202	0.93[CHD][hapmap]
rs1810639	0.96[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs1950769	0.81[GIH][hapmap]
rs1951411	0.81[JPT][hapmap]
rs1980654	0.88[ASW][hapmap];0.85[CEU][hapmap];0.90[CHB][hapmap];1.00[CHD][hapmap];0.94[GIH][hapmap];1.00[JPT][hapmap];0.80[LWK][hapmap];0.91[MEX][hapmap];0.81[MKK][hapmap];0.91[TSI][hapmap];0.85[YRI][hapmap];0.82[AFR][1000 genomes];0.83[AMR][1000 genomes];0.87[EUR][1000 genomes];0.94[ASN][1000 genomes]
rs1980655	0.85[CEU][hapmap];0.90[CHB][hapmap];1.00[JPT][hapmap];0.84[AMR][1000 genomes];0.87[EUR][1000 genomes];0.94[ASN][1000 genomes]
rs2093358	0.81[ASN][1000 genomes]
rs2180537	0.93[CHD][hapmap]
rs2208596	0.85[CEU][hapmap];0.90[CHB][hapmap];1.00[JPT][hapmap];0.81[AMR][1000 genomes];0.82[EUR][1000 genomes];0.84[ASN][1000 genomes]
rs2588832	1.00[CHD][hapmap];0.83[JPT][hapmap]
rs2588833	1.00[CHD][hapmap];0.83[JPT][hapmap];0.84[MEX][hapmap]
rs2767366	1.00[CHD][hapmap];0.83[JPT][hapmap]
rs28403941	0.82[EUR][1000 genomes]
rs28470365	0.83[AMR][1000 genomes];0.82[EUR][1000 genomes];0.84[ASN][1000 genomes]
rs28474827	0.80[EUR][1000 genomes];0.90[ASN][1000 genomes]
rs28509330	0.81[EUR][1000 genomes]
rs28652829	0.81[ASN][1000 genomes]
rs2877369	0.85[CEU][hapmap];0.90[CHB][hapmap];0.91[JPT][hapmap]
rs33949561	0.85[AMR][1000 genomes];0.93[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs372143	1.00[CHD][hapmap];0.83[JPT][hapmap];0.84[MEX][hapmap]
rs373918	0.83[JPT][hapmap]
rs401021	0.83[JPT][hapmap]
rs408156	0.83[JPT][hapmap]
rs411547	0.82[JPT][hapmap]
rs431649	1.00[CHD][hapmap];0.83[JPT][hapmap];0.84[MEX][hapmap]
rs437585	0.83[JPT][hapmap]
rs4436722	0.85[CEU][hapmap];0.90[CHB][hapmap];0.91[JPT][hapmap]
rs4899231	0.96[AMR][1000 genomes];0.95[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs4899232	0.95[AMR][1000 genomes];0.94[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs4902535	0.85[CEU][hapmap];0.90[CHB][hapmap];0.91[JPT][hapmap]
rs4902536	0.85[CEU][hapmap];0.90[CHB][hapmap];1.00[CHD][hapmap];0.97[GIH][hapmap];0.91[JPT][hapmap];0.91[MEX][hapmap];0.91[TSI][hapmap]
rs4902538	0.85[CEU][hapmap];0.90[CHB][hapmap];1.00[CHD][hapmap];0.97[GIH][hapmap];0.91[JPT][hapmap];0.91[MEX][hapmap];0.91[TSI][hapmap]
rs4902540	0.85[CEU][hapmap];0.90[CHB][hapmap];0.91[JPT][hapmap];0.81[EUR][1000 genomes]
rs4902544	0.82[EUR][1000 genomes];0.81[ASN][1000 genomes]
rs4902545	0.96[AMR][1000 genomes];0.92[EUR][1000 genomes];0.95[ASN][1000 genomes]
rs4902547	0.96[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs4902548	0.81[JPT][hapmap]
rs4902550	0.81[JPT][hapmap]
rs57069083	0.91[EUR][1000 genomes];0.86[ASN][1000 genomes]
rs57990032	0.82[EUR][1000 genomes];0.84[ASN][1000 genomes]
rs60201005	0.82[EUR][1000 genomes]
rs60471554	0.89[AFR][1000 genomes];0.86[AMR][1000 genomes];0.87[EUR][1000 genomes];0.94[ASN][1000 genomes]
rs6573805	0.84[CEU][hapmap];0.90[CHB][hapmap];1.00[JPT][hapmap];0.82[EUR][1000 genomes];0.81[ASN][1000 genomes]
rs6573814	0.85[CEU][hapmap];0.81[AMR][1000 genomes];0.87[EUR][1000 genomes];0.94[ASN][1000 genomes]
rs6573815	0.81[JPT][hapmap]
rs6573816	0.81[JPT][hapmap]
rs67566613	0.93[AMR][1000 genomes];0.95[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs68139749	0.96[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs7142112	0.85[CEU][hapmap];0.90[CHB][hapmap];0.91[JPT][hapmap]
rs7142210	0.85[CEU][hapmap];0.90[CHB][hapmap];0.91[JPT][hapmap]
rs7146354	0.85[CEU][hapmap];0.90[CHB][hapmap];0.91[JPT][hapmap]
rs7147296	0.93[CHD][hapmap]
rs7147522	0.93[CHD][hapmap];0.81[JPT][hapmap]
rs7147935	0.93[CHD][hapmap];0.81[JPT][hapmap]
rs7148799	0.93[CHD][hapmap];0.81[JPT][hapmap]
rs7149343	0.93[CHD][hapmap];0.81[JPT][hapmap]
rs7150168	0.95[CEU][hapmap];1.00[CHB][hapmap];1.00[JPT][hapmap];0.96[AMR][1000 genomes];0.93[EUR][1000 genomes];0.98[ASN][1000 genomes]
rs7151235	0.89[CHB][hapmap];0.82[ASN][1000 genomes]
rs7154228	0.81[JPT][hapmap]
rs7154646	0.85[CEU][hapmap];0.90[CHB][hapmap];1.00[CHD][hapmap];0.97[GIH][hapmap];0.91[JPT][hapmap];0.91[MEX][hapmap];0.91[TSI][hapmap];0.81[EUR][1000 genomes]
rs7155097	0.84[CEU][hapmap];0.90[CHB][hapmap];0.91[JPT][hapmap]
rs7155840	0.80[CEU][hapmap];0.90[CHB][hapmap];0.91[JPT][hapmap]
rs7156822	0.87[ASN][1000 genomes]
rs7157152	0.82[JPT][hapmap]
rs7157185	0.84[CEU][hapmap];0.90[CHB][hapmap];0.91[JPT][hapmap];0.81[EUR][1000 genomes]
rs7158544	0.85[CEU][hapmap];0.90[CHB][hapmap];1.00[JPT][hapmap];0.82[EUR][1000 genomes];0.81[ASN][1000 genomes]
rs7160115	0.81[EUR][1000 genomes]
rs7161069	0.81[AMR][1000 genomes];0.87[EUR][1000 genomes];0.94[ASN][1000 genomes]
rs72725183	0.83[AMR][1000 genomes];0.81[EUR][1000 genomes]
rs72725185	0.91[AMR][1000 genomes];0.89[EUR][1000 genomes]
rs72725186	0.83[AMR][1000 genomes];0.85[EUR][1000 genomes]
rs72725187	0.91[AMR][1000 genomes];0.89[EUR][1000 genomes]
rs72725188	0.91[AMR][1000 genomes];0.89[EUR][1000 genomes]
rs72725190	0.96[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs7359083	0.93[CHD][hapmap];0.81[JPT][hapmap]
rs8006492	0.81[AMR][1000 genomes];0.87[EUR][1000 genomes];0.94[ASN][1000 genomes]
rs8007347	0.93[CHD][hapmap];0.81[JPT][hapmap]
rs8008791	0.93[CHD][hapmap]
rs8011621	0.91[AMR][1000 genomes];0.92[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs8012493	0.81[JPT][hapmap]
rs8013677	0.83[CEU][hapmap]
rs8014000	1.00[CEU][hapmap];1.00[CHB][hapmap];1.00[CHD][hapmap];1.00[GIH][hapmap];1.00[JPT][hapmap];1.00[MEX][hapmap];0.86[MKK][hapmap];1.00[TSI][hapmap];0.96[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs8016525	0.85[CEU][hapmap];0.90[CHB][hapmap];0.91[JPT][hapmap]
rs8018029	0.81[JPT][hapmap]
rs8020795	1.00[ASW][hapmap];0.85[CEU][hapmap];0.90[CHB][hapmap];1.00[CHD][hapmap];0.97[GIH][hapmap];1.00[JPT][hapmap];0.87[LWK][hapmap];0.91[MEX][hapmap];0.86[MKK][hapmap];0.91[TSI][hapmap];0.89[YRI][hapmap];0.86[AFR][1000 genomes];0.81[EUR][1000 genomes];0.81[ASN][1000 genomes]
rs9323501	0.81[CEU][hapmap];0.90[CHB][hapmap];0.91[JPT][hapmap]
rs9323502	0.85[AMR][1000 genomes];0.93[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs957930	0.81[JPT][hapmap]
rs9672142	0.89[CEU][hapmap];0.90[CHB][hapmap];0.90[JPT][hapmap];0.87[YRI][hapmap];0.87[AFR][1000 genomes];0.82[EUR][1000 genomes]

rSNP related genes

Symbol	Regulation type
RAD51B	RNA binding protein mediated regulation

rSNP related regulatory elements

Proximal transcriptional regulation

Distal transcriptional regulation

Post-transcriptional regulation:within mature miRNA

Post-transcriptional regulation: associated with RNA binding protein

eQTL evidence (count: 0)