SNP Report

Basic Infomation

Name	rs17104900 dbSNP
Location	chr:14,68551243
Allele	A/G

LD-proxy of rSNPs(r²>0.8) (count: 158)

The LD data used here is based on HapMap rel#27 and 1000 Genomes phase I data. LD SNP pairs were selected with a threshold r² >=0.8.

rs_ID	r²[population][source]
rs10129355	0.81[JPT][hapmap]
rs10129612	0.90[JPT][hapmap]
rs10130997	0.90[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs10132022	0.81[JPT][hapmap]
rs10132711	1.00[CHB][hapmap];0.86[JPT][hapmap];0.90[AFR][1000 genomes]
rs10132828	1.00[CEU][hapmap];1.00[CHB][hapmap];0.84[JPT][hapmap];0.93[YRI][hapmap]
rs10133485	1.00[CEU][hapmap]
rs10133652	1.00[CEU][hapmap];1.00[CHB][hapmap];0.90[JPT][hapmap];0.94[YRI][hapmap]
rs10134124	1.00[JPT][hapmap];0.80[ASN][1000 genomes]
rs10134320	1.00[JPT][hapmap];0.80[ASN][1000 genomes]
rs10134664	1.00[CEU][hapmap];1.00[CHB][hapmap];1.00[JPT][hapmap];1.00[YRI][hapmap];0.98[AFR][1000 genomes];1.00[AMR][1000 genomes];0.85[EUR][1000 genomes];0.98[ASN][1000 genomes]
rs10135046	1.00[CEU][hapmap];1.00[CHB][hapmap];1.00[JPT][hapmap];1.00[YRI][hapmap];0.98[AFR][1000 genomes];1.00[AMR][1000 genomes];0.85[EUR][1000 genomes];0.98[ASN][1000 genomes]
rs10135256	1.00[CEU][hapmap];1.00[CHB][hapmap];1.00[JPT][hapmap];0.86[YRI][hapmap];0.93[AFR][1000 genomes];1.00[AMR][1000 genomes];0.85[EUR][1000 genomes];0.98[ASN][1000 genomes]
rs10135316	1.00[CEU][hapmap];1.00[CHB][hapmap];0.91[JPT][hapmap];0.86[YRI][hapmap]
rs10135925	1.00[CEU][hapmap];1.00[CHB][hapmap];0.90[JPT][hapmap];0.85[YRI][hapmap]
rs10137330	0.84[ASN][1000 genomes]
rs10137457	1.00[CEU][hapmap];1.00[CHB][hapmap];1.00[JPT][hapmap];0.90[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs10137712	1.00[CEU][hapmap];1.00[CHB][hapmap];0.90[JPT][hapmap];0.81[ASN][1000 genomes]
rs10138719	0.90[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs10139236	0.82[JPT][hapmap]
rs10139386	0.82[JPT][hapmap]
rs10140465	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes];0.93[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs10141018	1.00[JPT][hapmap]
rs10142285	0.90[AFR][1000 genomes]
rs10143219	1.00[CEU][hapmap];1.00[CHB][hapmap];0.91[JPT][hapmap];0.83[YRI][hapmap]
rs10143455	0.81[JPT][hapmap]
rs10143895	1.00[CEU][hapmap];1.00[CHB][hapmap];0.91[JPT][hapmap];1.00[YRI][hapmap];0.90[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs10144128	1.00[CEU][hapmap];1.00[CHB][hapmap];0.90[JPT][hapmap];0.85[YRI][hapmap]
rs10144224	1.00[CHB][hapmap];1.00[JPT][hapmap];0.86[YRI][hapmap];0.93[AFR][1000 genomes];1.00[AMR][1000 genomes];0.85[EUR][1000 genomes];0.98[ASN][1000 genomes]
rs10145197	1.00[JPT][hapmap];0.84[ASN][1000 genomes]
rs10145884	1.00[CEU][hapmap];1.00[CHB][hapmap];0.91[JPT][hapmap];0.81[YRI][hapmap]
rs10146719	1.00[CEU][hapmap];1.00[CHB][hapmap];0.91[JPT][hapmap];1.00[YRI][hapmap];0.90[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs10146766	1.00[CEU][hapmap];1.00[CHB][hapmap];0.90[JPT][hapmap];1.00[YRI][hapmap];0.88[AFR][1000 genomes]
rs10146831	1.00[CEU][hapmap];1.00[CHB][hapmap];0.88[JPT][hapmap];0.95[YRI][hapmap];0.88[AFR][1000 genomes]
rs10147311	1.00[JPT][hapmap]
rs10147569	1.00[CEU][hapmap];1.00[CHB][hapmap];0.90[JPT][hapmap]
rs10148893	1.00[CEU][hapmap];1.00[CHB][hapmap];0.90[JPT][hapmap];0.81[YRI][hapmap]
rs10149801	0.80[ASN][1000 genomes]
rs10150330	0.88[AFR][1000 genomes]
rs10150584	0.85[CHB][hapmap];1.00[JPT][hapmap];0.84[ASN][1000 genomes]
rs10150789	0.99[AFR][1000 genomes];1.00[AMR][1000 genomes];0.85[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs10151123	1.00[CEU][hapmap];1.00[CHB][hapmap];0.91[JPT][hapmap];1.00[YRI][hapmap];0.90[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs10151317	1.00[CEU][hapmap];1.00[CHB][hapmap];0.91[JPT][hapmap];0.86[YRI][hapmap]
rs10450891	1.00[CEU][hapmap];1.00[CHB][hapmap];0.90[JPT][hapmap];0.95[YRI][hapmap]
rs1080958	0.82[JPT][hapmap]
rs10873211	0.84[ASN][1000 genomes]
rs10873212	0.84[ASN][1000 genomes]
rs11158710	1.00[CEU][hapmap];1.00[CHB][hapmap];0.90[JPT][hapmap];1.00[YRI][hapmap];0.90[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs11158719	0.81[JPT][hapmap]
rs11158720	0.85[CHB][hapmap];1.00[JPT][hapmap];0.92[ASN][1000 genomes]
rs11158721	1.00[JPT][hapmap];0.84[ASN][1000 genomes]
rs1118397	1.00[CEU][hapmap];1.00[CHB][hapmap];0.90[JPT][hapmap]
rs11622787	0.81[JPT][hapmap]
rs11623355	0.81[JPT][hapmap]
rs11623467	0.81[JPT][hapmap]
rs11844842	1.00[JPT][hapmap];0.84[ASN][1000 genomes]
rs11847339	1.00[JPT][hapmap];0.88[ASN][1000 genomes]
rs11849196	0.84[ASN][1000 genomes]
rs11851597	0.88[ASN][1000 genomes]
rs11851991	0.82[CHB][hapmap];1.00[JPT][hapmap];0.94[ASN][1000 genomes]
rs12437178	0.81[JPT][hapmap]
rs1548264	0.82[JPT][hapmap]
rs1548265	0.81[JPT][hapmap]
rs17104774	1.00[CEU][hapmap];1.00[CHB][hapmap];0.91[JPT][hapmap];1.00[YRI][hapmap];0.86[AFR][1000 genomes]
rs17104783	1.00[CEU][hapmap];1.00[CHB][hapmap];0.88[JPT][hapmap];1.00[YRI][hapmap];0.88[AFR][1000 genomes]
rs17104786	1.00[CEU][hapmap];1.00[CHB][hapmap];0.90[JPT][hapmap];1.00[YRI][hapmap];0.88[AFR][1000 genomes]
rs17104793	1.00[CEU][hapmap];1.00[CHB][hapmap];0.90[JPT][hapmap];0.85[YRI][hapmap]
rs17104796	1.00[CEU][hapmap];1.00[CHB][hapmap];0.90[JPT][hapmap];0.81[YRI][hapmap]
rs17104799	1.00[CEU][hapmap];1.00[CHB][hapmap];0.90[JPT][hapmap];0.86[YRI][hapmap]
rs17104823	1.00[CEU][hapmap];1.00[CHB][hapmap];0.90[JPT][hapmap]
rs17104824	1.00[CEU][hapmap];1.00[CHB][hapmap];0.91[JPT][hapmap];1.00[YRI][hapmap];0.90[AFR][1000 genomes]
rs17104827	1.00[CEU][hapmap];1.00[CHB][hapmap];0.90[JPT][hapmap];0.86[YRI][hapmap]
rs17104829	1.00[CEU][hapmap];1.00[CHB][hapmap];0.91[JPT][hapmap];1.00[YRI][hapmap];0.90[AFR][1000 genomes]
rs17104862	1.00[CEU][hapmap];1.00[CHB][hapmap];1.00[JPT][hapmap];1.00[YRI][hapmap];0.90[AFR][1000 genomes];1.00[AMR][1000 genomes];0.86[ASN][1000 genomes]
rs17104863	1.00[CEU][hapmap];1.00[CHB][hapmap];1.00[JPT][hapmap];1.00[YRI][hapmap];0.90[AFR][1000 genomes];1.00[AMR][1000 genomes];0.86[ASN][1000 genomes]
rs17104880	1.00[CEU][hapmap];1.00[CHB][hapmap];1.00[JPT][hapmap];1.00[YRI][hapmap];0.96[AFR][1000 genomes];1.00[AMR][1000 genomes];0.85[EUR][1000 genomes];0.98[ASN][1000 genomes]
rs17104889	0.81[JPT][hapmap]
rs17104908	0.81[JPT][hapmap]
rs17104917	0.85[CHB][hapmap];1.00[JPT][hapmap];0.94[ASN][1000 genomes]
rs17104947	1.00[JPT][hapmap];0.84[ASN][1000 genomes]
rs17104953	1.00[JPT][hapmap];0.84[ASN][1000 genomes]
rs17104992	1.00[JPT][hapmap];0.84[ASN][1000 genomes]
rs17105001	0.85[CHB][hapmap];1.00[JPT][hapmap];0.90[ASN][1000 genomes]
rs17783202	1.00[CEU][hapmap];1.00[CHB][hapmap];0.90[JPT][hapmap];0.94[YRI][hapmap]
rs1950766	1.00[CEU][hapmap];1.00[CHB][hapmap];0.90[JPT][hapmap]
rs1951411	1.00[JPT][hapmap];0.84[ASN][1000 genomes]
rs1980654	0.81[JPT][hapmap]
rs1980655	0.81[JPT][hapmap]
rs2057361	0.85[CHB][hapmap];1.00[JPT][hapmap];0.92[ASN][1000 genomes]
rs2180537	1.00[CEU][hapmap];1.00[CHB][hapmap];0.90[JPT][hapmap];1.00[YRI][hapmap];0.86[AFR][1000 genomes]
rs2208596	0.81[JPT][hapmap]
rs28372014	0.81[ASN][1000 genomes]
rs28434770	0.86[AFR][1000 genomes]
rs28448732	0.93[AFR][1000 genomes];1.00[AMR][1000 genomes];0.85[EUR][1000 genomes];0.96[ASN][1000 genomes]
rs28516665	0.88[AFR][1000 genomes]
rs28716846	0.90[ASN][1000 genomes]
rs28757308	0.88[AFR][1000 genomes]
rs28816808	0.88[AFR][1000 genomes]
rs28869007	0.90[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs28896840	0.88[ASN][1000 genomes]
rs4899229	1.00[CEU][hapmap];0.95[YRI][hapmap]
rs4902530	1.00[CEU][hapmap]
rs4902531	1.00[CEU][hapmap];0.85[YRI][hapmap]
rs4902534	0.86[AFR][1000 genomes]
rs4902541	0.90[AFR][1000 genomes]
rs4902548	1.00[JPT][hapmap];0.88[ASN][1000 genomes]
rs4902550	1.00[JPT][hapmap]
rs60562079	0.88[ASN][1000 genomes]
rs60841871	0.84[ASN][1000 genomes]
rs6573802	1.00[CEU][hapmap];1.00[CHB][hapmap];0.89[JPT][hapmap];1.00[YRI][hapmap];0.84[AFR][1000 genomes]
rs6573805	0.81[JPT][hapmap]
rs6573806	0.90[AFR][1000 genomes];1.00[AMR][1000 genomes];0.86[ASN][1000 genomes]
rs6573815	1.00[JPT][hapmap]
rs6573816	1.00[JPT][hapmap]
rs7140987	0.90[AFR][1000 genomes]
rs7145089	0.88[ASN][1000 genomes]
rs7147296	1.00[CEU][hapmap];1.00[CHB][hapmap];0.90[JPT][hapmap];1.00[YRI][hapmap];0.86[AFR][1000 genomes]
rs7147522	1.00[JPT][hapmap];0.84[ASN][1000 genomes]
rs7147935	1.00[JPT][hapmap];0.80[ASN][1000 genomes]
rs7148799	1.00[JPT][hapmap];0.84[ASN][1000 genomes]
rs7149343	1.00[JPT][hapmap];0.88[ASN][1000 genomes]
rs7149460	1.00[CEU][hapmap];1.00[CHB][hapmap];0.91[JPT][hapmap];1.00[YRI][hapmap];0.88[AFR][1000 genomes]
rs7150168	0.81[JPT][hapmap]
rs7150716	1.00[JPT][hapmap];0.84[ASN][1000 genomes]
rs7153470	0.88[AFR][1000 genomes]
rs7153978	0.88[ASN][1000 genomes]
rs7154228	1.00[JPT][hapmap];0.88[ASN][1000 genomes]
rs7154645	0.82[CHB][hapmap];1.00[JPT][hapmap];0.88[ASN][1000 genomes]
rs7154725	1.00[CEU][hapmap];1.00[CHB][hapmap];0.91[JPT][hapmap];1.00[YRI][hapmap];0.88[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs7155152	0.88[ASN][1000 genomes]
rs7157152	1.00[JPT][hapmap];0.84[ASN][1000 genomes]
rs7157550	1.00[CEU][hapmap];1.00[CHB][hapmap];0.91[JPT][hapmap];1.00[YRI][hapmap];0.90[AFR][1000 genomes];0.83[AMR][1000 genomes]
rs7157720	1.00[CEU][hapmap];1.00[CHB][hapmap];0.91[JPT][hapmap];1.00[YRI][hapmap];0.88[AFR][1000 genomes]
rs7158544	0.81[JPT][hapmap]
rs7160068	0.84[ASN][1000 genomes]
rs7161070	0.90[ASN][1000 genomes]
rs73286292	0.84[ASN][1000 genomes]
rs7359083	0.85[CHB][hapmap];1.00[JPT][hapmap];0.94[ASN][1000 genomes]
rs8003181	0.83[AFR][1000 genomes]
rs8006175	1.00[CEU][hapmap];1.00[CHB][hapmap];0.91[JPT][hapmap];0.95[YRI][hapmap]
rs8007347	0.85[CHB][hapmap];1.00[JPT][hapmap];0.90[ASN][1000 genomes]
rs8008413	0.88[ASN][1000 genomes]
rs8008791	1.00[CEU][hapmap];1.00[CHB][hapmap];0.90[JPT][hapmap];0.85[YRI][hapmap]
rs8011367	0.84[ASN][1000 genomes]
rs8012493	1.00[JPT][hapmap];0.80[ASN][1000 genomes]
rs8013061	0.84[ASN][1000 genomes]
rs8014000	0.81[JPT][hapmap]
rs8014844	0.88[AFR][1000 genomes]
rs8015741	1.00[CEU][hapmap];1.00[CHB][hapmap];0.90[JPT][hapmap];1.00[YRI][hapmap];0.87[AFR][1000 genomes]
rs8018029	1.00[CEU][hapmap];1.00[CHB][hapmap];1.00[JPT][hapmap];0.86[YRI][hapmap];0.92[AFR][1000 genomes];1.00[AMR][1000 genomes];0.85[EUR][1000 genomes];0.98[ASN][1000 genomes]
rs8020512	1.00[CEU][hapmap];1.00[CHB][hapmap];0.90[JPT][hapmap];0.86[YRI][hapmap]
rs8020795	0.81[JPT][hapmap]
rs957930	1.00[CEU][hapmap];1.00[CHB][hapmap];1.00[JPT][hapmap];1.00[YRI][hapmap];0.90[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs9652362	1.00[CEU][hapmap];1.00[CHB][hapmap];0.91[JPT][hapmap];0.86[YRI][hapmap]
rs9652363	1.00[CEU][hapmap];1.00[CHB][hapmap];0.91[JPT][hapmap];0.86[YRI][hapmap]
rs9652364	1.00[CEU][hapmap];1.00[CHB][hapmap];0.91[JPT][hapmap];1.00[YRI][hapmap];0.88[AFR][1000 genomes]
rs9672111	1.00[CEU][hapmap];1.00[CHB][hapmap];1.00[JPT][hapmap];1.00[YRI][hapmap];0.90[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs9796374	1.00[CEU][hapmap];1.00[CHB][hapmap];0.90[JPT][hapmap];0.86[YRI][hapmap]

rSNP related genes

Symbol	Regulation type
RAD51B	RNA binding protein mediated regulation

rSNP related regulatory elements

Proximal transcriptional regulation

Distal transcriptional regulation

Post-transcriptional regulation:within mature miRNA

Post-transcriptional regulation: associated with RNA binding protein

eQTL evidence (count: 0)