SNP Report

Basic Infomation

Name	rs28869007 dbSNP
Location	chr:14,68470401
Allele	G/A

LD-proxy of rSNPs(r²>0.8) (count: 112)

The LD data used here is based on HapMap rel#27 and 1000 Genomes phase I data. LD SNP pairs were selected with a threshold r² >=0.8.

rs_ID	r²[population][source]
rs10130605	0.84[AFR][1000 genomes];1.00[ASN][1000 genomes]
rs10130837	0.84[AFR][1000 genomes];1.00[ASN][1000 genomes]
rs10130997	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs10131828	0.86[AFR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs10132711	1.00[AFR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs10132828	0.86[AFR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs10133485	1.00[ASN][1000 genomes]
rs10133652	0.83[AFR][1000 genomes];1.00[ASN][1000 genomes]
rs10134664	0.90[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs10135046	0.90[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs10135256	0.86[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs10135316	0.82[AFR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs10135925	0.84[AFR][1000 genomes];1.00[ASN][1000 genomes]
rs10137457	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs10137712	0.96[ASN][1000 genomes]
rs10138719	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];0.98[ASN][1000 genomes]
rs10140465	0.90[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs10142285	1.00[AFR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs10143219	0.83[AFR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs10143895	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs10144128	0.86[AFR][1000 genomes];0.85[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs10144224	0.86[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs10145884	1.00[ASN][1000 genomes]
rs10146113	0.82[AFR][1000 genomes];0.84[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs10146189	0.83[AFR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs10146719	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];0.98[ASN][1000 genomes]
rs10146766	0.97[AFR][1000 genomes];1.00[ASN][1000 genomes]
rs10146831	0.97[AFR][1000 genomes];1.00[ASN][1000 genomes]
rs10147569	1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs10147820	0.83[AFR][1000 genomes];0.86[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs10148893	1.00[ASN][1000 genomes]
rs10150330	0.97[AFR][1000 genomes];1.00[ASN][1000 genomes]
rs10150789	0.91[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs10151123	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs10151317	0.83[AFR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs10450891	0.84[AFR][1000 genomes];1.00[ASN][1000 genomes]
rs10467819	0.83[AFR][1000 genomes];1.00[ASN][1000 genomes]
rs1073024	0.80[AFR][1000 genomes];1.00[ASN][1000 genomes]
rs1073025	0.80[AFR][1000 genomes];1.00[ASN][1000 genomes]
rs1073026	0.84[AFR][1000 genomes];1.00[ASN][1000 genomes]
rs11158710	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs1118397	1.00[ASN][1000 genomes]
rs17104758	1.00[ASN][1000 genomes]
rs17104774	0.95[AFR][1000 genomes];1.00[ASN][1000 genomes]
rs17104783	0.97[AFR][1000 genomes];0.96[ASN][1000 genomes]
rs17104786	0.97[AFR][1000 genomes];1.00[ASN][1000 genomes]
rs17104793	0.80[AFR][1000 genomes];1.00[ASN][1000 genomes]
rs17104796	0.80[AFR][1000 genomes];1.00[ASN][1000 genomes]
rs17104799	0.84[AFR][1000 genomes];1.00[ASN][1000 genomes]
rs17104823	1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs17104824	1.00[AFR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs17104827	0.83[AFR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs17104829	1.00[AFR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs17104862	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];0.92[ASN][1000 genomes]
rs17104863	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];0.92[ASN][1000 genomes]
rs17104880	0.94[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs17104900	0.90[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs17783202	0.83[AFR][1000 genomes];1.00[ASN][1000 genomes]
rs1950766	1.00[EUR][1000 genomes];0.98[ASN][1000 genomes]
rs2180537	0.95[AFR][1000 genomes];1.00[ASN][1000 genomes]
rs28405326	0.91[ASN][1000 genomes]
rs28408783	0.91[ASN][1000 genomes]
rs28434770	0.95[AFR][1000 genomes];1.00[ASN][1000 genomes]
rs28444090	0.86[AFR][1000 genomes];1.00[ASN][1000 genomes]
rs28448732	0.88[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs28516665	0.97[AFR][1000 genomes];1.00[ASN][1000 genomes]
rs28701947	0.86[AFR][1000 genomes];1.00[ASN][1000 genomes]
rs28751570	0.93[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs28751961	0.80[AFR][1000 genomes]
rs28757308	0.97[AFR][1000 genomes];1.00[ASN][1000 genomes]
rs28816808	0.97[AFR][1000 genomes];1.00[ASN][1000 genomes]
rs28833913	0.80[AFR][1000 genomes]
rs28835585	0.80[AFR][1000 genomes]
rs28896907	1.00[ASN][1000 genomes]
rs34700596	0.85[AFR][1000 genomes];1.00[ASN][1000 genomes]
rs4899228	0.80[AFR][1000 genomes]
rs4899229	0.80[AFR][1000 genomes]
rs4902529	0.80[AFR][1000 genomes]
rs4902530	0.80[AFR][1000 genomes]
rs4902532	0.80[AFR][1000 genomes]
rs4902534	0.95[AFR][1000 genomes];0.98[ASN][1000 genomes]
rs4902537	0.84[AFR][1000 genomes];1.00[ASN][1000 genomes]
rs4902541	1.00[AFR][1000 genomes];0.85[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs4902543	0.82[AFR][1000 genomes];0.85[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs60014063	1.00[ASN][1000 genomes]
rs6573802	0.94[AFR][1000 genomes];1.00[ASN][1000 genomes]
rs6573806	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];0.92[ASN][1000 genomes]
rs7140987	1.00[AFR][1000 genomes];1.00[ASN][1000 genomes]
rs7147296	0.95[AFR][1000 genomes];1.00[ASN][1000 genomes]
rs7149460	0.97[AFR][1000 genomes];1.00[ASN][1000 genomes]
rs7153470	0.97[AFR][1000 genomes];1.00[ASN][1000 genomes]
rs7154725	0.98[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs7157550	1.00[AFR][1000 genomes];0.83[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs7157720	0.97[AFR][1000 genomes];1.00[ASN][1000 genomes]
rs73282485	1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs73284210	1.00[EUR][1000 genomes];0.98[ASN][1000 genomes]
rs8003181	0.93[AFR][1000 genomes];1.00[ASN][1000 genomes]
rs8006175	0.83[AFR][1000 genomes];1.00[ASN][1000 genomes]
rs8008791	0.84[AFR][1000 genomes];1.00[ASN][1000 genomes]
rs8014844	0.97[AFR][1000 genomes];1.00[ASN][1000 genomes]
rs8015741	0.96[AFR][1000 genomes];1.00[ASN][1000 genomes]
rs8016246	0.80[AFR][1000 genomes]
rs8016563	0.80[AFR][1000 genomes];1.00[ASN][1000 genomes]
rs8017930	0.80[AFR][1000 genomes]
rs8018029	0.89[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs8020512	0.84[AFR][1000 genomes];1.00[ASN][1000 genomes]
rs957930	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs9652362	0.84[AFR][1000 genomes];1.00[ASN][1000 genomes]
rs9652363	0.84[AFR][1000 genomes];0.96[ASN][1000 genomes]
rs9652364	0.97[AFR][1000 genomes];1.00[ASN][1000 genomes]
rs9672111	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs9796374	0.86[AFR][1000 genomes];1.00[ASN][1000 genomes]

rSNP related genes

Symbol	Regulation type
RAD51B	RNA binding protein mediated regulation

rSNP related regulatory elements

Proximal transcriptional regulation

Distal transcriptional regulation

Post-transcriptional regulation:within mature miRNA

Post-transcriptional regulation: associated with RNA binding protein

eQTL evidence (count: 0)