SNP Report

Basic Infomation

Name	rs7157152 dbSNP
Location	chr:14,68581013
Allele	T/C

LD-proxy of rSNPs(r²>0.8) (count: 135)

The LD data used here is based on HapMap rel#27 and 1000 Genomes phase I data. LD SNP pairs were selected with a threshold r² >=0.8.

rs_ID	r²[population][source]
rs10129355	0.82[JPT][hapmap]
rs10129612	0.84[JPT][hapmap]
rs10132022	0.82[JPT][hapmap]
rs10132711	0.84[JPT][hapmap]
rs10132828	0.82[JPT][hapmap]
rs10133770	0.93[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];0.92[ASN][1000 genomes]
rs10134124	0.84[CHB][hapmap];1.00[JPT][hapmap];0.97[YRI][hapmap];0.94[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];0.96[ASN][1000 genomes]
rs10134320	0.82[CHB][hapmap];1.00[JPT][hapmap];0.96[YRI][hapmap];0.92[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];0.96[ASN][1000 genomes]
rs10134664	1.00[JPT][hapmap];0.86[ASN][1000 genomes]
rs10135046	1.00[JPT][hapmap];0.86[ASN][1000 genomes]
rs10135256	1.00[JPT][hapmap];0.86[ASN][1000 genomes]
rs10135316	0.84[JPT][hapmap]
rs10135925	0.82[JPT][hapmap]
rs10137330	0.98[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs10137457	1.00[JPT][hapmap]
rs10137712	0.82[JPT][hapmap]
rs10139236	0.84[JPT][hapmap]
rs10139386	0.84[JPT][hapmap]
rs10140465	0.84[ASN][1000 genomes]
rs10141018	0.82[CHB][hapmap];1.00[JPT][hapmap];0.92[YRI][hapmap];0.94[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];0.94[ASN][1000 genomes]
rs10143219	0.84[JPT][hapmap]
rs10143455	0.82[JPT][hapmap]
rs10143895	0.84[JPT][hapmap]
rs10144128	0.82[JPT][hapmap]
rs10144224	1.00[JPT][hapmap];0.86[ASN][1000 genomes]
rs10145197	0.84[CHB][hapmap];1.00[JPT][hapmap];0.97[YRI][hapmap];0.96[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs10146719	0.84[JPT][hapmap]
rs10146766	0.82[JPT][hapmap]
rs10146831	0.84[JPT][hapmap]
rs10147311	0.84[CHB][hapmap];1.00[JPT][hapmap];1.00[YRI][hapmap];0.94[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];0.94[ASN][1000 genomes]
rs10147569	0.82[JPT][hapmap]
rs10148713	1.00[EUR][1000 genomes]
rs10149801	0.90[AMR][1000 genomes];1.00[EUR][1000 genomes];0.96[ASN][1000 genomes]
rs10150584	0.84[CHB][hapmap];1.00[JPT][hapmap];1.00[EUR][1000 genomes];0.88[ASN][1000 genomes]
rs10150789	0.84[ASN][1000 genomes]
rs10151123	0.84[JPT][hapmap]
rs10151317	0.84[JPT][hapmap]
rs10450891	0.84[JPT][hapmap]
rs1080958	0.84[JPT][hapmap]
rs10873211	0.96[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs10873212	0.97[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs11158710	0.82[JPT][hapmap]
rs11158719	0.82[JPT][hapmap]
rs11158720	0.84[CHB][hapmap];1.00[JPT][hapmap];1.00[EUR][1000 genomes];0.92[ASN][1000 genomes]
rs11158721	0.84[CHB][hapmap];1.00[JPT][hapmap];0.96[YRI][hapmap];0.96[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs11622787	0.82[JPT][hapmap]
rs11623355	0.82[JPT][hapmap]
rs11623467	0.82[JPT][hapmap]
rs11844842	0.84[CHB][hapmap];1.00[JPT][hapmap];0.89[YRI][hapmap];0.97[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs11847339	0.82[CHB][hapmap];1.00[JPT][hapmap];0.87[YRI][hapmap];0.81[AFR][1000 genomes];0.90[AMR][1000 genomes];1.00[EUR][1000 genomes];0.96[ASN][1000 genomes]
rs11849196	0.96[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs11851597	1.00[EUR][1000 genomes];0.96[ASN][1000 genomes]
rs11851991	0.82[CHB][hapmap];1.00[JPT][hapmap];1.00[EUR][1000 genomes];0.90[ASN][1000 genomes]
rs12437178	0.82[JPT][hapmap]
rs1548264	0.84[JPT][hapmap]
rs1548265	0.82[JPT][hapmap]
rs17104774	0.84[JPT][hapmap]
rs17104783	0.84[JPT][hapmap]
rs17104786	0.82[JPT][hapmap]
rs17104793	0.84[JPT][hapmap]
rs17104796	0.82[JPT][hapmap]
rs17104799	0.84[JPT][hapmap]
rs17104823	0.82[JPT][hapmap]
rs17104824	0.84[JPT][hapmap]
rs17104827	0.84[JPT][hapmap]
rs17104829	0.84[JPT][hapmap]
rs17104862	1.00[JPT][hapmap]
rs17104863	1.00[JPT][hapmap]
rs17104880	1.00[JPT][hapmap];0.86[ASN][1000 genomes]
rs17104889	0.82[JPT][hapmap]
rs17104900	1.00[JPT][hapmap];0.84[ASN][1000 genomes]
rs17104908	0.82[JPT][hapmap]
rs17104917	0.84[CHB][hapmap];1.00[JPT][hapmap];1.00[EUR][1000 genomes];0.90[ASN][1000 genomes]
rs17104947	0.84[CHB][hapmap];1.00[JPT][hapmap];0.87[YRI][hapmap];0.82[AFR][1000 genomes];0.90[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs17104953	0.82[CHB][hapmap];1.00[JPT][hapmap];1.00[YRI][hapmap];1.00[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs17104992	0.84[CHB][hapmap];1.00[JPT][hapmap];1.00[YRI][hapmap];0.97[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs17105001	0.84[CHB][hapmap];1.00[JPT][hapmap];0.94[ASN][1000 genomes]
rs1950766	0.82[JPT][hapmap]
rs1951411	0.84[CHB][hapmap];1.00[JPT][hapmap];0.84[YRI][hapmap];0.90[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs1980654	0.82[JPT][hapmap]
rs1980655	0.82[JPT][hapmap]
rs2057361	0.84[CHB][hapmap];1.00[JPT][hapmap];1.00[EUR][1000 genomes];0.92[ASN][1000 genomes]
rs2180537	0.82[JPT][hapmap]
rs2208596	0.82[JPT][hapmap]
rs2767364	1.00[EUR][1000 genomes]
rs28372014	0.88[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];0.96[ASN][1000 genomes]
rs28448732	0.84[ASN][1000 genomes]
rs28716846	1.00[EUR][1000 genomes];0.94[ASN][1000 genomes]
rs28896840	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];0.96[ASN][1000 genomes]
rs4902548	0.82[CHB][hapmap];1.00[JPT][hapmap];0.98[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];0.96[ASN][1000 genomes]
rs4902550	0.84[CHB][hapmap];1.00[JPT][hapmap];1.00[YRI][hapmap];0.96[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];0.94[ASN][1000 genomes]
rs60562079	0.98[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];0.96[ASN][1000 genomes]
rs60841871	0.89[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs6573805	0.82[JPT][hapmap]
rs6573815	0.84[CHB][hapmap];1.00[JPT][hapmap];1.00[YRI][hapmap];0.96[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];0.94[ASN][1000 genomes]
rs6573816	0.84[CHB][hapmap];1.00[JPT][hapmap];0.97[YRI][hapmap];0.95[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];0.94[ASN][1000 genomes]
rs7145089	0.93[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];0.96[ASN][1000 genomes]
rs7147296	0.82[JPT][hapmap]
rs7147522	0.84[CHB][hapmap];1.00[JPT][hapmap];1.00[YRI][hapmap];1.00[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs7147935	0.84[CHB][hapmap];1.00[JPT][hapmap];0.89[YRI][hapmap];0.90[AMR][1000 genomes];1.00[EUR][1000 genomes];0.96[ASN][1000 genomes]
rs7148799	0.84[CHB][hapmap];1.00[JPT][hapmap];0.96[YRI][hapmap];0.97[AFR][1000 genomes];0.89[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs7149343	0.84[CHB][hapmap];1.00[JPT][hapmap];1.00[YRI][hapmap];0.98[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];0.96[ASN][1000 genomes]
rs7149460	0.84[JPT][hapmap]
rs7150168	0.82[JPT][hapmap]
rs7150716	0.84[CHB][hapmap];1.00[JPT][hapmap];1.00[YRI][hapmap];1.00[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs7153978	0.98[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];0.96[ASN][1000 genomes]
rs7154228	0.84[CHB][hapmap];1.00[JPT][hapmap];1.00[YRI][hapmap];0.98[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];0.96[ASN][1000 genomes]
rs7154645	1.00[CHB][hapmap];1.00[JPT][hapmap];0.92[YRI][hapmap];0.98[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];0.96[ASN][1000 genomes]
rs7154725	0.84[JPT][hapmap]
rs7155152	0.98[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];0.96[ASN][1000 genomes]
rs7157550	0.84[JPT][hapmap]
rs7157720	0.84[JPT][hapmap]
rs7158544	0.84[JPT][hapmap]
rs7160068	0.88[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs7161070	1.00[EUR][1000 genomes];0.94[ASN][1000 genomes]
rs73286292	0.90[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs7359083	0.84[CHB][hapmap];1.00[JPT][hapmap];1.00[EUR][1000 genomes];0.90[ASN][1000 genomes]
rs8007347	0.84[CHB][hapmap];1.00[JPT][hapmap];1.00[EUR][1000 genomes];0.94[ASN][1000 genomes]
rs8008413	1.00[EUR][1000 genomes];0.96[ASN][1000 genomes]
rs8008791	0.82[JPT][hapmap]
rs8011367	0.96[AFR][1000 genomes];0.90[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs8012493	0.84[CHB][hapmap];1.00[JPT][hapmap];1.00[EUR][1000 genomes];0.96[ASN][1000 genomes]
rs8013061	0.82[AFR][1000 genomes];0.90[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs8014000	0.82[JPT][hapmap]
rs8015741	0.82[JPT][hapmap]
rs8018029	1.00[JPT][hapmap];0.86[ASN][1000 genomes]
rs8020512	0.82[JPT][hapmap]
rs8020795	0.82[JPT][hapmap]
rs957930	1.00[JPT][hapmap]
rs9652362	0.84[JPT][hapmap]
rs9652363	0.84[JPT][hapmap]
rs9652364	0.84[JPT][hapmap]
rs9672111	1.00[JPT][hapmap]
rs9672142	0.82[JPT][hapmap]
rs9796374	0.82[JPT][hapmap]

rSNP related genes

Symbol	Regulation type
ZFP36L1	Distal transcriptional regulation
RAD51B	RNA binding protein mediated regulation

rSNP related regulatory elements

Proximal transcriptional regulation

Distal transcriptional regulation

Post-transcriptional regulation:within mature miRNA

Post-transcriptional regulation: associated with RNA binding protein

eQTL evidence (count: 0)