SNP Report
| Name | rs8014000   dbSNP |
|---|---|
| Location | chr:14,68547517 |
| Allele | A/G |
The LD data used here is based on HapMap rel#27 and 1000 Genomes phase I data. LD SNP pairs were selected with a threshold r2 >=0.8.
| rs_ID | r2[population][source] |
|---|---|
| rs10129355 | 0.85[CEU][hapmap];0.90[CHB][hapmap];1.00[JPT][hapmap];0.82[EUR][1000 genomes];0.81[ASN][1000 genomes] |
| rs10129612 | 0.85[CEU][hapmap];0.90[CHB][hapmap];1.00[JPT][hapmap];0.81[ASN][1000 genomes] |
| rs10130829 | 0.81[EUR][1000 genomes] |
| rs10132022 | 0.81[CEU][hapmap];0.90[CHB][hapmap];1.00[CHD][hapmap];0.97[GIH][hapmap];1.00[JPT][hapmap];0.84[MEX][hapmap];0.85[TSI][hapmap];0.84[ASN][1000 genomes] |
| rs10133262 | 0.89[ASW][hapmap];0.85[CEU][hapmap];0.90[CHB][hapmap];1.00[CHD][hapmap];0.97[GIH][hapmap];0.91[JPT][hapmap];0.91[MEX][hapmap];0.91[TSI][hapmap];0.90[YRI][hapmap] |
| rs10133652 | 0.93[CHD][hapmap] |
| rs10133883 | 0.84[AMR][1000 genomes];0.87[EUR][1000 genomes];0.94[ASN][1000 genomes] |
| rs10134124 | 0.81[JPT][hapmap] |
| rs10134664 | 0.81[JPT][hapmap] |
| rs10135046 | 0.81[JPT][hapmap] |
| rs10135256 | 0.81[JPT][hapmap] |
| rs10135925 | 0.93[CHD][hapmap] |
| rs10136129 | 0.85[CEU][hapmap];0.90[CHB][hapmap];0.90[JPT][hapmap];0.81[EUR][1000 genomes] |
| rs10136790 | 0.85[CEU][hapmap];0.90[CHB][hapmap];0.91[JPT][hapmap];0.90[YRI][hapmap] |
| rs10136868 | 0.85[AMR][1000 genomes];0.85[EUR][1000 genomes];0.94[ASN][1000 genomes] |
| rs10137233 | 1.00[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes] |
| rs10139236 | 1.00[CEU][hapmap];1.00[CHB][hapmap];1.00[JPT][hapmap];0.96[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes] |
| rs10139386 | 1.00[CEU][hapmap];1.00[CHB][hapmap];1.00[JPT][hapmap];1.00[YRI][hapmap];0.98[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes] |
| rs10140097 | 0.85[CEU][hapmap];0.82[EUR][1000 genomes];0.81[ASN][1000 genomes] |
| rs10140282 | 0.81[EUR][1000 genomes] |
| rs10140420 | 0.98[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes] |
| rs10140493 | 1.00[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes] |
| rs10143455 | 0.84[ASW][hapmap];0.85[CEU][hapmap];0.90[CHB][hapmap];1.00[CHD][hapmap];0.97[GIH][hapmap];1.00[JPT][hapmap];0.91[MEX][hapmap];0.91[TSI][hapmap];0.86[YRI][hapmap];0.81[EUR][1000 genomes];0.81[ASN][1000 genomes] |
| rs10143843 | 0.85[CEU][hapmap];0.90[CHB][hapmap];0.91[JPT][hapmap];0.81[EUR][1000 genomes] |
| rs10144128 | 0.93[CHD][hapmap] |
| rs10144224 | 0.81[JPT][hapmap] |
| rs10145197 | 0.81[JPT][hapmap] |
| rs10147311 | 0.88[JPT][hapmap] |
| rs10148527 | 0.90[CHB][hapmap];0.91[JPT][hapmap] |
| rs1015023 | 0.81[GIH][hapmap] |
| rs10150584 | 0.81[JPT][hapmap] |
| rs10151115 | 0.99[AFR][1000 genomes];1.00[AMR][1000 genomes];0.95[EUR][1000 genomes];1.00[ASN][1000 genomes] |
| rs1080956 | 0.93[AFR][1000 genomes];1.00[AMR][1000 genomes];0.95[EUR][1000 genomes];1.00[ASN][1000 genomes] |
| rs1080957 | 1.00[CEU][hapmap];0.96[AFR][1000 genomes];1.00[AMR][1000 genomes];0.95[EUR][1000 genomes];1.00[ASN][1000 genomes] |
| rs1080958 | 1.00[CEU][hapmap];1.00[CHB][hapmap];1.00[JPT][hapmap];0.96[YRI][hapmap];0.96[AFR][1000 genomes];1.00[AMR][1000 genomes];0.95[EUR][1000 genomes];1.00[ASN][1000 genomes] |
| rs11158710 | 0.93[CHD][hapmap] |
| rs11158715 | 0.90[CHB][hapmap];0.91[JPT][hapmap];0.81[ASN][1000 genomes] |
| rs11158717 | 0.82[EUR][1000 genomes];0.94[ASN][1000 genomes] |
| rs11158718 | 0.80[AMR][1000 genomes];0.85[EUR][1000 genomes] |
| rs11158719 | 1.00[CEU][hapmap];1.00[CHB][hapmap];1.00[CHD][hapmap];1.00[GIH][hapmap];1.00[JPT][hapmap];1.00[MEX][hapmap];0.86[MKK][hapmap];1.00[TSI][hapmap];0.96[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes] |
| rs11158720 | 0.93[CHD][hapmap];0.81[JPT][hapmap] |
| rs11158721 | 0.93[CHD][hapmap];0.81[JPT][hapmap] |
| rs11622243 | 0.81[EUR][1000 genomes] |
| rs11622787 | 0.84[CEU][hapmap];0.90[CHB][hapmap];1.00[JPT][hapmap];0.82[EUR][1000 genomes] |
| rs11623355 | 0.83[ASW][hapmap];0.85[CEU][hapmap];0.90[CHB][hapmap];1.00[CHD][hapmap];0.97[GIH][hapmap];1.00[JPT][hapmap];0.82[LWK][hapmap];0.91[MEX][hapmap];0.84[MKK][hapmap];0.91[TSI][hapmap];0.86[YRI][hapmap];0.85[AMR][1000 genomes];0.87[EUR][1000 genomes];0.94[ASN][1000 genomes] |
| rs11623467 | 0.83[ASW][hapmap];0.95[CEU][hapmap];1.00[CHB][hapmap];1.00[CHD][hapmap];1.00[GIH][hapmap];1.00[JPT][hapmap];0.91[MEX][hapmap];0.84[MKK][hapmap];0.97[TSI][hapmap];0.93[AMR][1000 genomes];0.96[EUR][1000 genomes];1.00[ASN][1000 genomes] |
| rs11623984 | 0.83[AMR][1000 genomes];0.87[EUR][1000 genomes];0.94[ASN][1000 genomes] |
| rs11624209 | 0.96[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes] |
| rs11624484 | 0.85[CEU][hapmap];0.87[AMR][1000 genomes];0.88[EUR][1000 genomes] |
| rs11626594 | 0.81[GIH][hapmap] |
| rs11628745 | 0.99[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes] |
| rs11629073 | 0.87[AMR][1000 genomes];0.85[EUR][1000 genomes] |
| rs11844529 | 0.85[CEU][hapmap];0.90[CHB][hapmap];0.91[JPT][hapmap];0.86[YRI][hapmap];0.81[EUR][1000 genomes] |
| rs11844842 | 0.81[JPT][hapmap] |
| rs11846344 | 0.89[ASW][hapmap];0.85[CEU][hapmap];0.90[CHB][hapmap];1.00[CHD][hapmap];0.97[GIH][hapmap];0.91[JPT][hapmap];0.91[MEX][hapmap];0.91[TSI][hapmap];0.90[YRI][hapmap];0.81[EUR][1000 genomes] |
| rs11847339 | 0.81[JPT][hapmap] |
| rs11848187 | 0.88[AMR][1000 genomes];0.82[EUR][1000 genomes];0.89[ASN][1000 genomes] |
| rs11850191 | 0.89[ASW][hapmap];0.85[CEU][hapmap];0.90[CHB][hapmap];1.00[CHD][hapmap];0.97[GIH][hapmap];0.91[JPT][hapmap];0.91[MEX][hapmap];0.91[TSI][hapmap];0.90[YRI][hapmap];0.81[EUR][1000 genomes] |
| rs11851991 | 0.81[JPT][hapmap] |
| rs11852180 | 0.85[CEU][hapmap];0.90[CHB][hapmap];0.91[JPT][hapmap];0.86[YRI][hapmap];0.81[EUR][1000 genomes] |
| rs12100584 | 0.84[CEU][hapmap];0.90[CHB][hapmap];0.90[JPT][hapmap];0.86[YRI][hapmap] |
| rs12431697 | 0.81[CEU][hapmap];0.90[CHB][hapmap];1.00[CHD][hapmap];0.97[GIH][hapmap];0.91[JPT][hapmap];0.84[MEX][hapmap];0.85[TSI][hapmap] |
| rs12432681 | 0.85[AMR][1000 genomes];0.87[EUR][1000 genomes];0.94[ASN][1000 genomes] |
| rs12436203 | 0.80[AMR][1000 genomes];0.81[EUR][1000 genomes] |
| rs12437043 | 0.86[CHB][hapmap];0.89[JPT][hapmap];0.87[ASN][1000 genomes] |
| rs12437178 | 0.85[CEU][hapmap];0.90[CHB][hapmap];1.00[CHD][hapmap];0.97[GIH][hapmap];1.00[JPT][hapmap];0.91[MEX][hapmap];0.91[TSI][hapmap];0.82[EUR][1000 genomes] |
| rs13329056 | 0.90[CHB][hapmap];1.00[JPT][hapmap];0.82[EUR][1000 genomes] |
| rs1548264 | 1.00[CEU][hapmap];1.00[CHB][hapmap];1.00[JPT][hapmap];0.86[YRI][hapmap];0.86[AFR][1000 genomes];0.96[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes] |
| rs1548265 | 1.00[CEU][hapmap];1.00[CHB][hapmap];1.00[JPT][hapmap];1.00[YRI][hapmap];1.00[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes] |
| rs17104764 | 0.85[CEU][hapmap];0.90[CHB][hapmap];0.91[JPT][hapmap];0.86[YRI][hapmap] |
| rs17104776 | 0.85[CEU][hapmap];0.90[CHB][hapmap];0.91[JPT][hapmap];0.86[YRI][hapmap] |
| rs17104786 | 0.93[CHD][hapmap] |
| rs17104796 | 0.93[CHD][hapmap] |
| rs17104800 | 0.80[CEU][hapmap];0.90[CHB][hapmap];0.91[JPT][hapmap] |
| rs17104823 | 0.93[CHD][hapmap] |
| rs17104862 | 0.81[JPT][hapmap] |
| rs17104863 | 0.93[CHD][hapmap];0.81[JPT][hapmap] |
| rs17104880 | 0.81[JPT][hapmap] |
| rs17104889 | 0.94[ASW][hapmap];1.00[CEU][hapmap];1.00[CHB][hapmap];1.00[CHD][hapmap];1.00[GIH][hapmap];1.00[JPT][hapmap];0.96[LWK][hapmap];1.00[MEX][hapmap];0.99[MKK][hapmap];1.00[TSI][hapmap];0.96[YRI][hapmap];0.96[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes] |
| rs17104900 | 0.81[JPT][hapmap] |
| rs17104908 | 0.93[CHD][hapmap];1.00[JPT][hapmap];0.84[MEX][hapmap];0.86[ASN][1000 genomes] |
| rs17104917 | 0.93[CHD][hapmap];0.81[JPT][hapmap] |
| rs17104947 | 0.81[JPT][hapmap] |
| rs17104992 | 0.81[JPT][hapmap] |
| rs17105001 | 0.81[JPT][hapmap] |
| rs17783202 | 0.93[CHD][hapmap] |
| rs1810639 | 0.98[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes] |
| rs1950769 | 0.81[GIH][hapmap] |
| rs1951411 | 0.81[JPT][hapmap] |
| rs1980654 | 0.85[CEU][hapmap];0.90[CHB][hapmap];1.00[CHD][hapmap];0.94[GIH][hapmap];1.00[JPT][hapmap];0.91[MEX][hapmap];0.91[TSI][hapmap];0.87[EUR][1000 genomes];0.94[ASN][1000 genomes] |
| rs1980655 | 0.85[CEU][hapmap];0.90[CHB][hapmap];1.00[JPT][hapmap];1.00[YRI][hapmap];0.95[AFR][1000 genomes];0.88[AMR][1000 genomes];0.87[EUR][1000 genomes];0.94[ASN][1000 genomes] |
| rs2093358 | 0.81[ASN][1000 genomes] |
| rs2180537 | 0.93[CHD][hapmap] |
| rs2208596 | 0.85[CEU][hapmap];0.90[CHB][hapmap];1.00[JPT][hapmap];0.96[YRI][hapmap];0.84[AFR][1000 genomes];0.84[AMR][1000 genomes];0.82[EUR][1000 genomes];0.84[ASN][1000 genomes] |
| rs2588832 | 1.00[CHD][hapmap];0.83[JPT][hapmap] |
| rs2588833 | 1.00[CHD][hapmap];0.83[JPT][hapmap];0.84[MEX][hapmap] |
| rs2767366 | 1.00[CHD][hapmap];0.83[JPT][hapmap] |
| rs28403941 | 0.82[EUR][1000 genomes] |
| rs28470365 | 0.86[AMR][1000 genomes];0.82[EUR][1000 genomes];0.84[ASN][1000 genomes] |
| rs28474827 | 0.80[EUR][1000 genomes];0.90[ASN][1000 genomes] |
| rs28509330 | 0.81[EUR][1000 genomes] |
| rs28652829 | 0.81[ASN][1000 genomes] |
| rs2877369 | 0.85[CEU][hapmap];0.90[CHB][hapmap];0.91[JPT][hapmap];0.86[YRI][hapmap] |
| rs33949561 | 0.88[AMR][1000 genomes];0.93[EUR][1000 genomes];1.00[ASN][1000 genomes] |
| rs372143 | 1.00[CHD][hapmap];0.83[JPT][hapmap];0.84[MEX][hapmap] |
| rs373918 | 0.83[JPT][hapmap] |
| rs401021 | 0.83[JPT][hapmap] |
| rs408156 | 0.83[JPT][hapmap] |
| rs411547 | 0.82[JPT][hapmap] |
| rs431649 | 1.00[CHD][hapmap];0.83[JPT][hapmap];0.84[MEX][hapmap] |
| rs437585 | 0.83[JPT][hapmap] |
| rs4436722 | 0.85[CEU][hapmap];0.90[CHB][hapmap];0.91[JPT][hapmap] |
| rs4899231 | 0.90[AFR][1000 genomes];1.00[AMR][1000 genomes];0.95[EUR][1000 genomes];1.00[ASN][1000 genomes] |
| rs4899232 | 0.96[AFR][1000 genomes];0.98[AMR][1000 genomes];0.94[EUR][1000 genomes];1.00[ASN][1000 genomes] |
| rs4902535 | 0.85[CEU][hapmap];0.90[CHB][hapmap];0.91[JPT][hapmap];0.86[YRI][hapmap] |
| rs4902536 | 0.84[ASW][hapmap];0.85[CEU][hapmap];0.90[CHB][hapmap];1.00[CHD][hapmap];0.97[GIH][hapmap];0.91[JPT][hapmap];0.91[MEX][hapmap];0.91[TSI][hapmap];0.86[YRI][hapmap] |
| rs4902538 | 0.84[ASW][hapmap];0.85[CEU][hapmap];0.90[CHB][hapmap];1.00[CHD][hapmap];0.97[GIH][hapmap];0.91[JPT][hapmap];0.91[MEX][hapmap];0.91[TSI][hapmap];0.83[YRI][hapmap] |
| rs4902540 | 0.85[CEU][hapmap];0.90[CHB][hapmap];0.91[JPT][hapmap];0.86[YRI][hapmap];0.81[EUR][1000 genomes] |
| rs4902544 | 0.82[EUR][1000 genomes];0.81[ASN][1000 genomes] |
| rs4902545 | 0.99[AFR][1000 genomes];1.00[AMR][1000 genomes];0.92[EUR][1000 genomes];0.95[ASN][1000 genomes] |
| rs4902547 | 0.96[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes] |
| rs4902548 | 0.81[JPT][hapmap] |
| rs4902550 | 0.81[JPT][hapmap] |
| rs57069083 | 0.91[EUR][1000 genomes];0.86[ASN][1000 genomes] |
| rs57990032 | 0.81[AMR][1000 genomes];0.82[EUR][1000 genomes];0.84[ASN][1000 genomes] |
| rs60201005 | 0.82[EUR][1000 genomes] |
| rs60471554 | 0.83[AMR][1000 genomes];0.87[EUR][1000 genomes];0.94[ASN][1000 genomes] |
| rs6573805 | 0.84[CEU][hapmap];0.90[CHB][hapmap];1.00[JPT][hapmap];0.86[YRI][hapmap];0.82[EUR][1000 genomes];0.81[ASN][1000 genomes] |
| rs6573814 | 0.85[CEU][hapmap];0.82[AFR][1000 genomes];0.85[AMR][1000 genomes];0.87[EUR][1000 genomes];0.94[ASN][1000 genomes] |
| rs6573815 | 0.81[JPT][hapmap] |
| rs6573816 | 0.81[JPT][hapmap] |
| rs67566613 | 0.85[AFR][1000 genomes];0.96[AMR][1000 genomes];0.95[EUR][1000 genomes];1.00[ASN][1000 genomes] |
| rs68139749 | 0.94[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes] |
| rs7142112 | 0.85[CEU][hapmap];0.90[CHB][hapmap];0.91[JPT][hapmap];0.89[YRI][hapmap] |
| rs7142210 | 0.85[CEU][hapmap];0.90[CHB][hapmap];0.91[JPT][hapmap];0.89[YRI][hapmap] |
| rs7146354 | 0.85[CEU][hapmap];0.90[CHB][hapmap];0.91[JPT][hapmap];0.92[YRI][hapmap] |
| rs7147296 | 0.93[CHD][hapmap] |
| rs7147522 | 0.93[CHD][hapmap];0.81[JPT][hapmap] |
| rs7147935 | 0.93[CHD][hapmap];0.81[JPT][hapmap] |
| rs7148799 | 0.93[CHD][hapmap];0.81[JPT][hapmap] |
| rs7149343 | 0.93[CHD][hapmap];0.81[JPT][hapmap] |
| rs7150168 | 0.95[CEU][hapmap];1.00[CHB][hapmap];1.00[JPT][hapmap];1.00[YRI][hapmap];0.96[AFR][1000 genomes];1.00[AMR][1000 genomes];0.93[EUR][1000 genomes];0.98[ASN][1000 genomes] |
| rs7151235 | 0.89[CHB][hapmap];0.82[ASN][1000 genomes] |
| rs7154228 | 0.81[JPT][hapmap] |
| rs7154646 | 0.89[ASW][hapmap];0.85[CEU][hapmap];0.90[CHB][hapmap];1.00[CHD][hapmap];0.97[GIH][hapmap];0.91[JPT][hapmap];0.83[LWK][hapmap];0.91[MEX][hapmap];0.91[TSI][hapmap];0.90[YRI][hapmap];0.81[EUR][1000 genomes] |
| rs7155097 | 0.84[CEU][hapmap];0.90[CHB][hapmap];0.91[JPT][hapmap];0.86[YRI][hapmap] |
| rs7155840 | 0.80[CEU][hapmap];0.90[CHB][hapmap];0.91[JPT][hapmap] |
| rs7156822 | 0.87[ASN][1000 genomes] |
| rs7157152 | 0.82[JPT][hapmap] |
| rs7157185 | 0.84[CEU][hapmap];0.90[CHB][hapmap];0.91[JPT][hapmap];0.89[YRI][hapmap];0.81[EUR][1000 genomes] |
| rs7158544 | 0.85[CEU][hapmap];0.90[CHB][hapmap];1.00[JPT][hapmap];0.96[YRI][hapmap];0.87[AFR][1000 genomes];0.82[EUR][1000 genomes];0.81[ASN][1000 genomes] |
| rs7160115 | 0.81[EUR][1000 genomes] |
| rs7161069 | 0.82[AFR][1000 genomes];0.85[AMR][1000 genomes];0.87[EUR][1000 genomes];0.94[ASN][1000 genomes] |
| rs72725183 | 0.80[AMR][1000 genomes];0.81[EUR][1000 genomes] |
| rs72725185 | 0.87[AMR][1000 genomes];0.89[EUR][1000 genomes] |
| rs72725186 | 0.80[AMR][1000 genomes];0.85[EUR][1000 genomes] |
| rs72725187 | 0.87[AMR][1000 genomes];0.89[EUR][1000 genomes] |
| rs72725188 | 0.87[AMR][1000 genomes];0.89[EUR][1000 genomes] |
| rs72725190 | 0.96[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes] |
| rs7359083 | 0.93[CHD][hapmap];0.81[JPT][hapmap] |
| rs8006492 | 0.82[AFR][1000 genomes];0.85[AMR][1000 genomes];0.87[EUR][1000 genomes];0.94[ASN][1000 genomes] |
| rs8007347 | 0.93[CHD][hapmap];0.81[JPT][hapmap] |
| rs8008791 | 0.93[CHD][hapmap] |
| rs8011621 | 0.86[AFR][1000 genomes];0.95[AMR][1000 genomes];0.92[EUR][1000 genomes];1.00[ASN][1000 genomes] |
| rs8012493 | 0.81[JPT][hapmap] |
| rs8013677 | 0.83[CEU][hapmap];0.87[YRI][hapmap] |
| rs8016525 | 0.85[CEU][hapmap];0.90[CHB][hapmap];0.91[JPT][hapmap];0.89[YRI][hapmap] |
| rs8018029 | 0.81[JPT][hapmap] |
| rs8020795 | 0.85[CEU][hapmap];0.90[CHB][hapmap];1.00[CHD][hapmap];0.97[GIH][hapmap];1.00[JPT][hapmap];0.91[MEX][hapmap];0.91[TSI][hapmap];0.81[EUR][1000 genomes];0.81[ASN][1000 genomes] |
| rs9323501 | 0.81[CEU][hapmap];0.90[CHB][hapmap];0.91[JPT][hapmap] |
| rs9323502 | 0.88[AMR][1000 genomes];0.93[EUR][1000 genomes];1.00[ASN][1000 genomes] |
| rs957930 | 0.81[JPT][hapmap] |
| rs9672142 | 0.89[CEU][hapmap];0.90[CHB][hapmap];0.90[JPT][hapmap];0.82[EUR][1000 genomes] |
| Symbol | Regulation type |
|---|---|
| ZFP36L1 | Distal transcriptional regulation |
| RAD51B | RNA binding protein mediated regulation |
Copyright: Bioinformatics Lab, Institute of Psychology, Chinese Academy of Sciences Feedback
Last update: March 26, 2014




