SNP Report
Basic Infomation
| Name | rs12432193 dbSNP |
|---|---|
| Location | chr:14,68560763 |
| Allele | G/T |
LD-proxy of rSNPs(r2>0.8) (count: 23)
The LD data used here is based on HapMap rel#27 and 1000 Genomes phase I data. LD SNP pairs were selected with a threshold r2 >=0.8.
| rs_ID | r2[population][source] |
|---|---|
| rs11158718 | 0.86[ASN][1000 genomes] |
| rs11624484 | 0.86[ASN][1000 genomes] |
| rs11629073 | 0.86[ASN][1000 genomes] |
| rs12433779 | 1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];0.85[ASN][1000 genomes] |
| rs12436203 | 0.86[ASN][1000 genomes] |
| rs12437441 | 0.84[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes] |
| rs2038565 | 0.86[ASN][1000 genomes] |
| rs35517486 | 0.88[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes] |
| rs35701137 | 0.90[AMR][1000 genomes];0.86[EUR][1000 genomes] |
| rs35803514 | 1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];0.85[ASN][1000 genomes] |
| rs7154014 | 0.86[ASN][1000 genomes] |
| rs72725168 | 0.86[ASN][1000 genomes] |
| rs72725170 | 0.86[ASN][1000 genomes] |
| rs72725172 | 0.86[ASN][1000 genomes] |
| rs72725174 | 0.81[ASN][1000 genomes] |
| rs72725183 | 0.86[ASN][1000 genomes] |
| rs72725185 | 0.86[ASN][1000 genomes] |
| rs72725186 | 0.86[ASN][1000 genomes] |
| rs72725187 | 0.86[ASN][1000 genomes] |
| rs72725188 | 0.86[ASN][1000 genomes] |
| rs8015128 | 0.86[ASN][1000 genomes] |
| rs8021404 | 0.86[ASN][1000 genomes] |
| rs8022206 | 0.86[ASN][1000 genomes] |
rSNP related genes
| Symbol | Regulation type |
|---|---|
| RAD51B | RNA binding protein mediated regulation |
rSNP related regulatory elements
Proximal transcriptional regulation
Distal transcriptional regulation
Post-transcriptional regulation:within mature miRNA
Post-transcriptional regulation: associated with RNA binding protein
eQTL evidence (count: 0)
Copyright: Bioinformatics Lab, Institute of Psychology, Chinese Academy of Sciences Feedback
Last update: March 26, 2014