SNP Report

Basic Infomation

Name	rs2588830 dbSNP
Location	chr:14,68609319
Allele	A/G

LD-proxy of rSNPs(r²>0.8) (count: 77)

The LD data used here is based on HapMap rel#27 and 1000 Genomes phase I data. LD SNP pairs were selected with a threshold r² >=0.8.

rs_ID	r²[population][source]
rs1022978	0.88[EUR][1000 genomes]
rs1022979	0.84[EUR][1000 genomes]
rs11158718	0.84[CEU][hapmap]
rs11624484	0.89[CEU][hapmap]
rs12437043	0.87[AMR][1000 genomes];0.85[EUR][1000 genomes]
rs12894297	0.84[EUR][1000 genomes]
rs1467673	0.84[EUR][1000 genomes]
rs1555944	1.00[JPT][hapmap];0.84[AMR][1000 genomes];0.84[EUR][1000 genomes];0.80[ASN][1000 genomes]
rs1555945	0.88[EUR][1000 genomes]
rs17104908	0.94[CEU][hapmap];0.87[AFR][1000 genomes];0.97[AMR][1000 genomes];0.92[EUR][1000 genomes]
rs1951410	0.80[AMR][1000 genomes];0.89[EUR][1000 genomes]
rs1952245	0.89[EUR][1000 genomes]
rs1952246	0.88[EUR][1000 genomes]
rs1958111	0.89[EUR][1000 genomes]
rs1958112	1.00[JPT][hapmap];0.84[AMR][1000 genomes];0.85[EUR][1000 genomes];0.80[ASN][1000 genomes]
rs1958113	0.89[EUR][1000 genomes]
rs1958115	0.88[EUR][1000 genomes]
rs1958116	0.84[EUR][1000 genomes]
rs1980850	0.84[EUR][1000 genomes]
rs2038979	0.88[EUR][1000 genomes]
rs2243905	0.88[EUR][1000 genomes]
rs2254173	0.83[EUR][1000 genomes]
rs2478777	0.80[EUR][1000 genomes]
rs2588806	0.88[EUR][1000 genomes]
rs2588807	0.88[EUR][1000 genomes]
rs2588808	0.88[EUR][1000 genomes]
rs2588813	1.00[JPT][hapmap];0.86[AMR][1000 genomes];0.85[EUR][1000 genomes];0.80[ASN][1000 genomes]
rs2588814	0.88[EUR][1000 genomes]
rs2588815	0.89[EUR][1000 genomes]
rs2588816	0.89[EUR][1000 genomes]
rs2588818	0.89[EUR][1000 genomes]
rs2588819	0.88[EUR][1000 genomes]
rs2588820	0.84[EUR][1000 genomes]
rs2588821	0.84[EUR][1000 genomes]
rs2588823	0.82[EUR][1000 genomes]
rs2588824	0.84[EUR][1000 genomes]
rs2588825	0.84[EUR][1000 genomes]
rs2588826	0.86[EUR][1000 genomes]
rs2588827	0.89[EUR][1000 genomes]
rs2588828	0.86[EUR][1000 genomes]
rs2588829	0.86[EUR][1000 genomes]
rs2588831	0.90[CEU][hapmap];0.92[AMR][1000 genomes];0.90[EUR][1000 genomes]
rs2588832	0.89[CEU][hapmap];0.85[AFR][1000 genomes];0.93[AMR][1000 genomes];0.86[EUR][1000 genomes]
rs2588833	0.94[CEU][hapmap];0.91[AFR][1000 genomes];0.97[AMR][1000 genomes];0.96[EUR][1000 genomes]
rs2588834	0.94[CEU][hapmap];0.93[EUR][1000 genomes]
rs2588835	0.89[AMR][1000 genomes];0.80[EUR][1000 genomes]
rs2767365	0.89[CEU][hapmap];0.93[EUR][1000 genomes]
rs2767366	0.85[CEU][hapmap];0.92[AMR][1000 genomes];0.88[EUR][1000 genomes]
rs2767367	0.85[AFR][1000 genomes];0.93[AMR][1000 genomes];0.88[EUR][1000 genomes]
rs2767368	0.90[EUR][1000 genomes]
rs2767379	0.88[EUR][1000 genomes]
rs2767382	0.87[EUR][1000 genomes]
rs2767383	0.88[EUR][1000 genomes]
rs2767384	0.88[EUR][1000 genomes]
rs365934	0.87[AFR][1000 genomes];0.97[AMR][1000 genomes];0.92[EUR][1000 genomes]
rs372143	0.94[CEU][hapmap];0.87[AFR][1000 genomes];0.97[AMR][1000 genomes];0.92[EUR][1000 genomes]
rs373918	0.94[CEU][hapmap];0.87[AFR][1000 genomes];0.97[AMR][1000 genomes];0.92[EUR][1000 genomes]
rs378408	0.87[AFR][1000 genomes];0.97[AMR][1000 genomes];0.92[EUR][1000 genomes]
rs401021	0.94[CEU][hapmap];0.87[AFR][1000 genomes];0.97[AMR][1000 genomes];0.92[EUR][1000 genomes]
rs408156	0.83[AFR][1000 genomes];0.86[AMR][1000 genomes]
rs411547	0.95[CEU][hapmap];0.87[AFR][1000 genomes];0.97[AMR][1000 genomes];0.92[EUR][1000 genomes]
rs419450	0.80[AMR][1000 genomes];0.89[EUR][1000 genomes]
rs424032	0.90[AMR][1000 genomes];0.83[EUR][1000 genomes]
rs431649	0.94[CEU][hapmap];0.87[AFR][1000 genomes];0.97[AMR][1000 genomes];0.92[EUR][1000 genomes]
rs435620	0.94[CEU][hapmap];0.87[AFR][1000 genomes];0.97[AMR][1000 genomes];0.92[EUR][1000 genomes]
rs437585	0.95[CEU][hapmap];0.89[AFR][1000 genomes];0.95[AMR][1000 genomes];0.96[EUR][1000 genomes]
rs440627	0.89[EUR][1000 genomes]
rs445921	0.82[AMR][1000 genomes];0.89[EUR][1000 genomes]
rs448445	0.95[CEU][hapmap];0.89[EUR][1000 genomes]
rs6573817	1.00[JPT][hapmap];0.84[AMR][1000 genomes];0.87[EUR][1000 genomes];0.80[ASN][1000 genomes]
rs7141160	0.94[CEU][hapmap];0.89[EUR][1000 genomes]
rs7141450	0.94[CEU][hapmap];0.89[EUR][1000 genomes]
rs7151235	0.81[AFR][1000 genomes];0.90[AMR][1000 genomes]
rs7156822	0.81[AFR][1000 genomes];0.93[AMR][1000 genomes];0.84[EUR][1000 genomes]
rs8011527	0.81[AMR][1000 genomes];0.85[EUR][1000 genomes];0.80[ASN][1000 genomes]
rs8014524	0.89[EUR][1000 genomes]
rs959039	0.89[EUR][1000 genomes]

rSNP related genes

Symbol	Regulation type
ZFP36L1	Distal transcriptional regulation
RAD51B	RNA binding protein mediated regulation

rSNP related regulatory elements

Proximal transcriptional regulation

Distal transcriptional regulation

Post-transcriptional regulation:within mature miRNA

Post-transcriptional regulation: associated with RNA binding protein

eQTL evidence (count: 0)