SNP Report

Basic Infomation

Name	rs11230871 dbSNP
Location	chr:11,61788646
Allele	T/A

LD-proxy of rSNPs(r²>0.8) (count: 28)

The LD data used here is based on HapMap rel#27 and 1000 Genomes phase I data. LD SNP pairs were selected with a threshold r² >=0.8.

rs_ID	r²[population][source]
rs10501388	1.00[CEU][hapmap];1.00[CHB][hapmap];1.00[JPT][hapmap];0.90[AMR][1000 genomes];0.99[EUR][1000 genomes];0.99[ASN][1000 genomes]
rs10736716	0.80[JPT][hapmap]
rs10750964	0.85[AMR][1000 genomes];0.96[EUR][1000 genomes];0.87[ASN][1000 genomes]
rs10792324	0.82[CHB][hapmap]
rs10792325	0.84[EUR][1000 genomes]
rs10792326	1.00[CEU][hapmap];0.95[CHB][hapmap];0.88[JPT][hapmap];0.86[AMR][1000 genomes];0.97[EUR][1000 genomes];0.87[ASN][1000 genomes]
rs10792327	1.00[CEU][hapmap];0.95[CHB][hapmap];0.89[JPT][hapmap];0.96[EUR][1000 genomes];0.87[ASN][1000 genomes]
rs10897198	0.90[CHB][hapmap];0.94[JPT][hapmap];0.81[ASN][1000 genomes]
rs10897199	0.82[ASN][1000 genomes]
rs10897206	0.97[EUR][1000 genomes];0.89[ASN][1000 genomes]
rs10897207	1.00[CEU][hapmap];0.83[EUR][1000 genomes]
rs11230859	0.83[ASN][1000 genomes]
rs11230866	1.00[CEU][hapmap];0.95[CHB][hapmap];1.00[JPT][hapmap];0.94[AFR][1000 genomes];0.97[AMR][1000 genomes];0.99[EUR][1000 genomes];0.97[ASN][1000 genomes]
rs11230876	0.92[EUR][1000 genomes];0.87[ASN][1000 genomes]
rs11230877	0.88[EUR][1000 genomes];0.87[ASN][1000 genomes]
rs12365622	0.97[AFR][1000 genomes];0.97[AMR][1000 genomes];0.99[EUR][1000 genomes];0.99[ASN][1000 genomes]
rs12422044	1.00[CEU][hapmap];0.95[CHB][hapmap];1.00[JPT][hapmap];0.94[AFR][1000 genomes];0.97[AMR][1000 genomes];0.99[EUR][1000 genomes];0.99[ASN][1000 genomes]
rs12575056	0.82[JPT][hapmap]
rs28880656	0.87[AFR][1000 genomes];0.91[AMR][1000 genomes];0.94[EUR][1000 genomes];0.94[ASN][1000 genomes]
rs3855281	1.00[CEU][hapmap];0.95[CHB][hapmap];1.00[JPT][hapmap];0.83[AMR][1000 genomes];0.99[EUR][1000 genomes];0.99[ASN][1000 genomes]
rs4313591	0.81[JPT][hapmap]
rs4963445	0.83[JPT][hapmap]
rs6591688	0.87[ASN][1000 genomes]
rs7930404	0.96[EUR][1000 genomes];0.90[ASN][1000 genomes]
rs7935835	0.95[CEU][hapmap]
rs7949314	0.81[AMR][1000 genomes];0.94[EUR][1000 genomes];0.97[ASN][1000 genomes]
rs7950734	0.82[CHB][hapmap]
rs907638	0.90[CHB][hapmap];0.89[JPT][hapmap];0.80[ASN][1000 genomes]

rSNP related genes

Symbol	Regulation type
FTH1	Distal transcriptional regulation
ENSG00000269089	Distal transcriptional regulation

rSNP related regulatory elements

Proximal transcriptional regulation

Distal transcriptional regulation

Post-transcriptional regulation:within mature miRNA

Post-transcriptional regulation: associated with RNA binding protein

eQTL evidence (count: 0)