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rVarBase
SNP Report
Basic Infomation
Name
rs10897199  
dbSNP
Location
chr:11,61771516
Allele
C/T
LD-proxy of rSNPs(r
2
>0.8) (count: 13)
The LD data used here is based on HapMap rel#27 and 1000 Genomes phase I data. LD SNP pairs were selected with a threshold r
2
>=0.8.
rs_ID
r
2
[population][source]
rs10501388
0.81[ASN][1000 genomes]
rs10897198
0.92[ASN][1000 genomes]
rs11230859
0.82[AMR][1000 genomes];0.98[EUR][1000 genomes];0.97[ASN][1000 genomes]
rs11230866
0.81[ASN][1000 genomes]
rs11230871
0.82[ASN][1000 genomes]
rs12365622
0.83[ASN][1000 genomes]
rs12422044
0.82[ASN][1000 genomes]
rs3855281
0.83[ASN][1000 genomes]
rs4963279
0.88[ASN][1000 genomes]
rs4963445
0.91[AFR][1000 genomes];0.91[AMR][1000 genomes]
rs61899773
0.88[AFR][1000 genomes];0.85[AMR][1000 genomes]
rs7949314
0.81[ASN][1000 genomes]
rs907638
0.92[AMR][1000 genomes];0.98[EUR][1000 genomes];0.94[ASN][1000 genomes]
rSNP related genes
Symbol
Regulation type
FTH1
Distal transcriptional regulation
ENSG00000269089
Distal transcriptional regulation
ENSG00000244176
Distal transcriptional regulation
rSNP related regulatory elements
Proximal transcriptional regulation
Distal transcriptional regulation
Post-transcriptional regulation:within mature miRNA
Post-transcriptional regulation: associated with RNA binding protein
eQTL evidence (count: 0)