SNP Report

Basic Infomation

LD-proxy of rSNPs(r²>0.8) (count: 24)

The LD data used here is based on HapMap rel#27 and 1000 Genomes phase I data. LD SNP pairs were selected with a threshold r² >=0.8.

rs_ID	r²[population][source]
rs10736716	1.00[CHB][hapmap];1.00[JPT][hapmap];1.00[ASN][1000 genomes]
rs10750960	1.00[ASN][1000 genomes]
rs10792322	0.81[JPT][hapmap]
rs11230871	0.82[JPT][hapmap]
rs12575518	0.85[CEU][hapmap]
rs12793372	0.93[ASN][1000 genomes]
rs17156618	0.81[GIH][hapmap]
rs1801621	0.85[CEU][hapmap]
rs2073588	0.85[CEU][hapmap]
rs4313591	1.00[CHB][hapmap];1.00[CHD][hapmap];1.00[JPT][hapmap];1.00[ASN][1000 genomes]
rs4963441	0.85[CHB][hapmap];0.95[JPT][hapmap];0.95[ASN][1000 genomes]
rs4963442	1.00[CHB][hapmap];1.00[CHD][hapmap];0.95[JPT][hapmap];0.98[ASN][1000 genomes]
rs57280117	0.96[ASN][1000 genomes]
rs57937104	0.81[AFR][1000 genomes];0.97[AMR][1000 genomes];0.91[EUR][1000 genomes];0.94[ASN][1000 genomes]
rs6591679	0.96[ASN][1000 genomes]
rs7112078	0.85[CEU][hapmap];0.88[YRI][hapmap];0.86[AFR][1000 genomes]
rs7112821	0.82[CEU][hapmap]
rs7115285	0.85[CEU][hapmap]
rs7115654	0.85[CEU][hapmap]
rs7115826	1.00[CEU][hapmap]
rs7117044	0.96[AFR][1000 genomes];1.00[AMR][1000 genomes];0.97[EUR][1000 genomes];0.98[ASN][1000 genomes]
rs7937198	0.85[CHB][hapmap];0.95[JPT][hapmap];0.86[ASN][1000 genomes]
rs907634	0.81[GIH][hapmap]
rs907638	0.85[JPT][hapmap]

rSNP related genes

Symbol	Regulation type
FTH1	Distal transcriptional regulation
ENSG00000269089	Distal transcriptional regulation

rSNP related regulatory elements

eQTL evidence (count: 1)