SNP Report
Basic Infomation
| Name | rs9314867 dbSNP |
|---|---|
| Location | chr:9,139387846 |
| Allele | C/T |
LD-proxy of rSNPs(r2>0.8) (count: 15)
The LD data used here is based on HapMap rel#27 and 1000 Genomes phase I data. LD SNP pairs were selected with a threshold r2 >=0.8.
| rs_ID | r2[population][source] |
|---|---|
| rs10870139 | 0.85[JPT][hapmap] |
| rs11145910 | 0.85[JPT][hapmap] |
| rs11145974 | 0.85[JPT][hapmap] |
| rs11146021 | 1.00[JPT][hapmap] |
| rs1135314 | 0.85[JPT][hapmap] |
| rs11999525 | 1.00[CHB][hapmap] |
| rs2229974 | 0.85[JPT][hapmap] |
| rs3812578 | 0.85[JPT][hapmap] |
| rs3812591 | 0.85[JPT][hapmap] |
| rs3812594 | 1.00[CHB][hapmap];1.00[JPT][hapmap] |
| rs3812595 | 1.00[CHB][hapmap];1.00[JPT][hapmap] |
| rs3923776 | 1.00[JPT][hapmap] |
| rs4400499 | 0.85[JPT][hapmap] |
| rs4413892 | 1.00[JPT][hapmap] |
| rs563 | 0.85[JPT][hapmap] |
rSNP related genes
| Symbol | Regulation type |
|---|---|
| NOTCH1 | Distal transcriptional regulation |
| ENSG00000237886 | Distal transcriptional regulation |
| MIR4674 | Distal transcriptional regulation |
rSNP related regulatory elements
Proximal transcriptional regulation
Distal transcriptional regulation
Post-transcriptional regulation:within mature miRNA
Post-transcriptional regulation: associated with RNA binding protein
eQTL evidence (count: 2)
Copyright: Bioinformatics Lab, Institute of Psychology, Chinese Academy of Sciences Feedback
Last update: March 26, 2014