SNP Report

Basic Infomation

Name	rs7180428 dbSNP
Location	chr:15,91130596
Allele	T/A

LD-proxy of rSNPs(r²>0.8) (count: 28)

The LD data used here is based on HapMap rel#27 and 1000 Genomes phase I data. LD SNP pairs were selected with a threshold r² >=0.8.

rs_ID	r²[population][source]
rs11853755	0.82[EUR][1000 genomes]
rs11855992	0.88[CEU][hapmap];0.90[EUR][1000 genomes]
rs11857213	0.81[EUR][1000 genomes]
rs11858728	0.87[EUR][1000 genomes]
rs12437598	0.86[ASN][1000 genomes]
rs12438950	0.90[CEU][hapmap];1.00[CHB][hapmap];1.00[JPT][hapmap];0.86[AMR][1000 genomes];0.97[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs12440050	0.90[CHB][hapmap];0.84[ASN][1000 genomes]
rs12440233	1.00[CHB][hapmap];1.00[JPT][hapmap];1.00[ASN][1000 genomes]
rs12440296	1.00[CHB][hapmap];1.00[JPT][hapmap];1.00[ASN][1000 genomes]
rs12441772	1.00[CHB][hapmap];0.90[JPT][hapmap]
rs12442319	1.00[ASN][1000 genomes]
rs12442767	0.90[CHB][hapmap];0.85[ASN][1000 genomes]
rs12442943	1.00[CHB][hapmap];0.90[JPT][hapmap];0.88[ASN][1000 genomes]
rs56852223	0.82[EUR][1000 genomes]
rs6496694	0.88[CEU][hapmap];1.00[CHB][hapmap];1.00[JPT][hapmap];0.81[AMR][1000 genomes];0.94[EUR][1000 genomes];0.97[ASN][1000 genomes]
rs7162010	0.90[CEU][hapmap];0.90[EUR][1000 genomes]
rs7162382	1.00[CEU][hapmap];1.00[CHB][hapmap];1.00[JPT][hapmap];0.98[AMR][1000 genomes];0.99[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs7164690	1.00[ASN][1000 genomes]
rs7169230	0.80[CEU][hapmap]
rs7175054	0.90[EUR][1000 genomes]
rs7175707	0.90[EUR][1000 genomes]
rs7182899	0.81[EUR][1000 genomes]
rs8024877	1.00[CEU][hapmap];1.00[CHB][hapmap];1.00[JPT][hapmap];0.95[AMR][1000 genomes];0.99[EUR][1000 genomes];0.98[ASN][1000 genomes]
rs8025115	0.81[AMR][1000 genomes];0.94[EUR][1000 genomes];0.97[ASN][1000 genomes]
rs8031453	0.88[EUR][1000 genomes]
rs8033053	0.84[EUR][1000 genomes]
rs8040777	0.82[EUR][1000 genomes]
rs8041663	1.00[CHB][hapmap];1.00[JPT][hapmap];0.81[AMR][1000 genomes];0.94[EUR][1000 genomes];0.97[ASN][1000 genomes]

rSNP related genes

Symbol	Regulation type
CRTC3	RNA binding protein mediated regulation

rSNP related regulatory elements

Proximal transcriptional regulation

Distal transcriptional regulation

Post-transcriptional regulation:within mature miRNA

Post-transcriptional regulation: associated with RNA binding protein

eQTL evidence (count: 0)