SNP Report

Basic Infomation

LD-proxy of rSNPs(r²>0.8) (count: 23)

The LD data used here is based on HapMap rel#27 and 1000 Genomes phase I data. LD SNP pairs were selected with a threshold r² >=0.8.

rs_ID	r²[population][source]
rs12437598	0.87[EUR][1000 genomes];0.86[ASN][1000 genomes]
rs12437992	0.85[AMR][1000 genomes]
rs12438468	0.85[AMR][1000 genomes]
rs12438950	1.00[ASN][1000 genomes]
rs12439797	0.85[AMR][1000 genomes]
rs12440050	0.84[ASN][1000 genomes]
rs12440233	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs12440296	0.85[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs12442319	0.85[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs12442767	0.87[EUR][1000 genomes];0.85[ASN][1000 genomes]
rs12442785	0.85[AMR][1000 genomes]
rs12442943	1.00[EUR][1000 genomes];0.88[ASN][1000 genomes]
rs13329433	1.00[AFR][1000 genomes]
rs2286288	0.85[AMR][1000 genomes]
rs28412812	1.00[AFR][1000 genomes]
rs35584114	0.85[AMR][1000 genomes]
rs6496694	0.97[ASN][1000 genomes]
rs7162382	1.00[ASN][1000 genomes]
rs7166684	0.82[AFR][1000 genomes]
rs7180428	1.00[ASN][1000 genomes]
rs8024877	0.98[ASN][1000 genomes]
rs8025115	0.97[ASN][1000 genomes]
rs8041663	0.97[ASN][1000 genomes]

rSNP related genes

Symbol	Regulation type
CRTC3	Proximal transcriptional regulation
CRTC3	Distal transcriptional regulation
CRTC3	RNA binding protein mediated regulation

rSNP related regulatory elements

eQTL evidence (count: 0)