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rVarBase
SNP Report
Basic Infomation
Name
rs7166684  
dbSNP
Location
chr:15,91117273
Allele
A/T
LD-proxy of rSNPs(r
2
>0.8) (count: 7)
The LD data used here is based on HapMap rel#27 and 1000 Genomes phase I data. LD SNP pairs were selected with a threshold r
2
>=0.8.
rs_ID
r
2
[population][source]
rs11073936
1.00[MKK][hapmap]
rs12440233
0.82[AFR][1000 genomes]
rs13329433
0.82[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs28412812
0.82[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs28582782
0.96[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs7164690
0.82[AFR][1000 genomes]
rs73490314
1.00[AMR][1000 genomes]
rSNP related genes
Symbol
Regulation type
CRTC3
RNA binding protein mediated regulation
rSNP related regulatory elements
Proximal transcriptional regulation
Distal transcriptional regulation
Post-transcriptional regulation:within mature miRNA
Post-transcriptional regulation: associated with RNA binding protein
eQTL evidence (count: 2)
eQTL related gene
Source
C17orf91
SCAN
CIB1
seeQTL