SNP Report
Name | rs7162382   dbSNP |
---|---|
Location | chr:15,91139083 |
Allele | A/G |
The LD data used here is based on HapMap rel#27 and 1000 Genomes phase I data. LD SNP pairs were selected with a threshold r2 >=0.8.
rs_ID | r2[population][source] |
---|---|
rs11853755 | 0.81[EUR][1000 genomes] |
rs11855992 | 0.88[CEU][hapmap];0.95[TSI][hapmap];0.88[EUR][1000 genomes] |
rs11857213 | 0.82[EUR][1000 genomes] |
rs11858728 | 0.86[EUR][1000 genomes] |
rs12437598 | 0.86[ASN][1000 genomes] |
rs12438950 | 0.88[CEU][hapmap];1.00[CHB][hapmap];1.00[JPT][hapmap];0.84[AMR][1000 genomes];0.99[EUR][1000 genomes];1.00[ASN][1000 genomes] |
rs12440050 | 0.90[CHB][hapmap];0.84[ASN][1000 genomes] |
rs12440233 | 1.00[CHB][hapmap];1.00[JPT][hapmap];1.00[ASN][1000 genomes] |
rs12440296 | 1.00[CHB][hapmap];1.00[JPT][hapmap];1.00[ASN][1000 genomes] |
rs12441772 | 1.00[CHB][hapmap];0.89[JPT][hapmap] |
rs12442319 | 1.00[ASN][1000 genomes] |
rs12442767 | 0.90[CHB][hapmap];0.86[CHD][hapmap];0.85[ASN][1000 genomes] |
rs12442943 | 1.00[CHB][hapmap];0.89[JPT][hapmap];0.88[ASN][1000 genomes] |
rs56852223 | 0.81[EUR][1000 genomes] |
rs6496694 | 0.88[CEU][hapmap];1.00[CHB][hapmap];0.90[CHD][hapmap];1.00[JPT][hapmap];0.91[TSI][hapmap];0.84[AMR][1000 genomes];0.95[EUR][1000 genomes];0.97[ASN][1000 genomes] |
rs7162010 | 0.88[CEU][hapmap];0.88[EUR][1000 genomes] |
rs7164690 | 1.00[ASN][1000 genomes] |
rs7175054 | 0.87[CEU][hapmap];0.88[EUR][1000 genomes] |
rs7175707 | 0.88[EUR][1000 genomes] |
rs7180428 | 1.00[CEU][hapmap];1.00[CHB][hapmap];1.00[JPT][hapmap];0.98[AMR][1000 genomes];0.99[EUR][1000 genomes];1.00[ASN][1000 genomes] |
rs7182899 | 0.96[TSI][hapmap];0.82[EUR][1000 genomes] |
rs8024877 | 1.00[CEU][hapmap];1.00[CHB][hapmap];1.00[JPT][hapmap];0.93[AMR][1000 genomes];1.00[EUR][1000 genomes];0.98[ASN][1000 genomes] |
rs8025115 | 0.95[EUR][1000 genomes];0.97[ASN][1000 genomes] |
rs8028854 | 0.84[LWK][hapmap];0.93[MKK][hapmap];0.82[AFR][1000 genomes] |
rs8031453 | 0.95[TSI][hapmap];0.87[EUR][1000 genomes] |
rs8033053 | 0.83[EUR][1000 genomes] |
rs8040777 | 0.81[EUR][1000 genomes] |
rs8041663 | 1.00[CHB][hapmap];1.00[JPT][hapmap];0.95[EUR][1000 genomes];0.97[ASN][1000 genomes] |
Symbol | Regulation type |
---|---|
CRTC3 | Proximal transcriptional regulation |
CRTC3 | Distal transcriptional regulation |
ENSG00000259212 | RNA binding protein mediated regulation |
CRTC3 | RNA binding protein mediated regulation |
Copyright: Bioinformatics Lab, Institute of Psychology, Chinese Academy of Sciences Feedback
Last update: March 26, 2014