SNP Report

Basic Infomation

Name	rs7134572 dbSNP
Location	chr:12,40673368
Allele	G/A

LD-proxy of rSNPs(r²>0.8) (count: 33)

The LD data used here is based on HapMap rel#27 and 1000 Genomes phase I data. LD SNP pairs were selected with a threshold r² >=0.8.

rs_ID	r²[population][source]
rs10506148	0.86[CHB][hapmap];0.84[ASN][1000 genomes]
rs10784528	1.00[CEU][hapmap];0.91[CHB][hapmap];0.92[EUR][1000 genomes]
rs10878291	0.82[AMR][1000 genomes]
rs11564115	0.85[CHB][hapmap];0.84[ASN][1000 genomes]
rs1388596	0.95[CHB][hapmap];0.84[JPT][hapmap];0.88[ASN][1000 genomes]
rs1427259	0.90[CEU][hapmap]
rs1427261	0.88[CEU][hapmap]
rs1472117	0.81[CHB][hapmap];0.82[ASN][1000 genomes]
rs1491939	0.90[CHB][hapmap];0.85[JPT][hapmap];0.88[ASN][1000 genomes]
rs17484286	0.95[CHB][hapmap];0.90[JPT][hapmap];0.94[ASN][1000 genomes]
rs1816207	0.90[CEU][hapmap]
rs1817817	0.82[ASN][1000 genomes]
rs1907634	0.82[ASN][1000 genomes]
rs2131088	0.86[CHB][hapmap];0.85[ASN][1000 genomes]
rs2201144	0.85[CHB][hapmap];0.81[ASN][1000 genomes]
rs2708436	0.82[ASN][1000 genomes]
rs2708437	0.85[CHB][hapmap];0.82[ASN][1000 genomes]
rs2708438	0.85[CHB][hapmap];0.82[ASN][1000 genomes]
rs2708441	0.82[ASN][1000 genomes]
rs2723268	0.85[ASN][1000 genomes]
rs2723269	0.86[CHB][hapmap];0.85[ASN][1000 genomes]
rs3861083	0.90[CEU][hapmap]
rs4099579	0.90[CEU][hapmap]
rs4465428	1.00[CEU][hapmap];0.91[CHB][hapmap];1.00[YRI][hapmap];0.80[AMR][1000 genomes];0.93[EUR][1000 genomes];0.82[ASN][1000 genomes]
rs4473003	1.00[CEU][hapmap];1.00[CHB][hapmap];1.00[JPT][hapmap];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];0.98[ASN][1000 genomes]
rs4767971	0.91[CEU][hapmap];0.91[CHB][hapmap];0.92[EUR][1000 genomes];0.80[ASN][1000 genomes]
rs4767972	0.83[CEU][hapmap]
rs4768238	0.90[EUR][1000 genomes]
rs7131694	1.00[CEU][hapmap];0.91[CHB][hapmap];1.00[YRI][hapmap];0.92[EUR][1000 genomes];0.80[ASN][1000 genomes]
rs715402	1.00[CEU][hapmap];0.91[CHB][hapmap];0.84[AMR][1000 genomes];0.92[EUR][1000 genomes];0.83[ASN][1000 genomes]
rs7307310	1.00[CEU][hapmap];0.91[CHB][hapmap];0.92[EUR][1000 genomes];0.80[ASN][1000 genomes]
rs7962370	1.00[CEU][hapmap];0.82[CHB][hapmap];0.90[EUR][1000 genomes]
rs7963086	1.00[CEU][hapmap];0.91[CHB][hapmap];0.86[AMR][1000 genomes];0.92[EUR][1000 genomes];0.80[ASN][1000 genomes]

rSNP related genes

Symbol	Regulation type
LRRK2	RNA binding protein mediated regulation

rSNP related regulatory elements

Proximal transcriptional regulation

Distal transcriptional regulation

Post-transcriptional regulation:within mature miRNA

Post-transcriptional regulation: associated with RNA binding protein

eQTL evidence (count: 0)