SNP Report

Basic Infomation

Name	rs1816207 dbSNP
Location	chr:12,40794845
Allele	G/A

LD-proxy of rSNPs(r²>0.8) (count: 59)

The LD data used here is based on HapMap rel#27 and 1000 Genomes phase I data. LD SNP pairs were selected with a threshold r² >=0.8.

rs_ID	r²[population][source]
rs1035812	0.83[JPT][hapmap]
rs1035813	0.84[JPT][hapmap]
rs10748040	0.84[JPT][hapmap]
rs10784518	0.83[JPT][hapmap]
rs10784528	0.90[CEU][hapmap];0.89[JPT][hapmap];0.82[EUR][1000 genomes]
rs10784536	0.84[JPT][hapmap]
rs11564230	0.84[JPT][hapmap]
rs1365763	0.84[JPT][hapmap]
rs1365765	0.84[JPT][hapmap]
rs1365766	0.84[JPT][hapmap]
rs1427259	1.00[CEU][hapmap];1.00[CHB][hapmap];1.00[JPT][hapmap];0.98[AMR][1000 genomes];1.00[EUR][1000 genomes];0.98[ASN][1000 genomes]
rs1427261	1.00[CEU][hapmap];1.00[CHB][hapmap];1.00[JPT][hapmap];0.98[AMR][1000 genomes];1.00[EUR][1000 genomes];0.98[ASN][1000 genomes]
rs1427271	0.84[JPT][hapmap]
rs1427272	0.84[JPT][hapmap]
rs1427273	0.84[JPT][hapmap]
rs2404836	0.84[JPT][hapmap]
rs3789330	0.83[JPT][hapmap]
rs3861083	1.00[CEU][hapmap];1.00[CHB][hapmap];1.00[JPT][hapmap];0.98[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs3943893	0.84[JPT][hapmap]
rs4099579	1.00[CEU][hapmap];1.00[CHB][hapmap];1.00[JPT][hapmap];0.93[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs4465428	0.90[CEU][hapmap]
rs4473003	0.88[CEU][hapmap]
rs4767971	0.82[CEU][hapmap];0.89[JPT][hapmap];0.82[EUR][1000 genomes]
rs4767972	0.83[JPT][hapmap]
rs4767974	1.00[CHB][hapmap];0.90[JPT][hapmap];0.95[ASN][1000 genomes]
rs4767975	1.00[CHB][hapmap];0.90[JPT][hapmap];0.94[ASN][1000 genomes]
rs4768232	0.84[JPT][hapmap]
rs4768234	0.84[JPT][hapmap]
rs4768235	0.84[JPT][hapmap]
rs4768238	0.83[EUR][1000 genomes]
rs4768250	0.94[ASN][1000 genomes]
rs6581723	1.00[CHB][hapmap];1.00[JPT][hapmap];1.00[YRI][hapmap];0.93[AFR][1000 genomes];0.91[AMR][1000 genomes];0.98[ASN][1000 genomes]
rs7131694	0.90[CEU][hapmap];0.89[JPT][hapmap];0.82[EUR][1000 genomes]
rs7134572	0.90[CEU][hapmap]
rs7136122	1.00[CHB][hapmap];1.00[JPT][hapmap];0.89[ASN][1000 genomes]
rs7137437	0.84[JPT][hapmap]
rs715402	0.90[CEU][hapmap];0.89[JPT][hapmap];0.82[EUR][1000 genomes]
rs7294952	0.84[JPT][hapmap]
rs7294958	0.84[JPT][hapmap]
rs7306545	0.84[JPT][hapmap]
rs7307310	0.88[CEU][hapmap];0.89[JPT][hapmap];0.82[EUR][1000 genomes]
rs7308626	0.83[JPT][hapmap]
rs7311247	0.84[JPT][hapmap]
rs7313525	0.84[JPT][hapmap]
rs7313895	0.84[JPT][hapmap]
rs7314455	0.83[JPT][hapmap]
rs7314863	0.84[JPT][hapmap]
rs7954061	0.84[JPT][hapmap]
rs7956787	0.84[JPT][hapmap]
rs7956898	0.84[JPT][hapmap]
rs7957151	0.84[JPT][hapmap]
rs7962116	0.84[JPT][hapmap]
rs7962370	0.88[CEU][hapmap];0.83[EUR][1000 genomes]
rs7963086	0.90[CEU][hapmap];0.89[JPT][hapmap];0.82[EUR][1000 genomes]
rs7963987	0.84[JPT][hapmap]
rs7971919	0.84[JPT][hapmap]
rs7976724	0.84[JPT][hapmap]
rs890575	0.84[JPT][hapmap]
rs919175	0.84[JPT][hapmap]

rSNP related genes

Symbol	Regulation type
ENSG00000258167	Distal transcriptional regulation

rSNP related regulatory elements

Proximal transcriptional regulation

Distal transcriptional regulation

Post-transcriptional regulation:within mature miRNA

Post-transcriptional regulation: associated with RNA binding protein

eQTL evidence (count: 0)