SNP Report
Name | rs296563 dbSNP |
---|---|
Location | chr:1,200944840 |
Allele | T/G |
The LD data used here is based on HapMap rel#27 and 1000 Genomes phase I data. LD SNP pairs were selected with a threshold r2 >=0.8.
rs_ID | r2[population][source] |
---|---|
rs10494828 | 0.84[EUR][1000 genomes] |
rs10920074 | 0.82[AMR][1000 genomes] |
rs10920083 | 0.90[ASN][1000 genomes] |
rs10920084 | 0.94[EUR][1000 genomes] |
rs10920087 | 0.90[ASN][1000 genomes] |
rs10920091 | 0.81[ASN][1000 genomes] |
rs11580823 | 0.82[EUR][1000 genomes] |
rs11584383 | 0.93[EUR][1000 genomes] |
rs11586763 | 0.80[EUR][1000 genomes] |
rs11589573 | 0.83[EUR][1000 genomes] |
rs12118735 | 0.88[EUR][1000 genomes] |
rs12122721 | 0.80[EUR][1000 genomes] |
rs12126806 | 0.82[EUR][1000 genomes] |
rs12140420 | 0.84[EUR][1000 genomes] |
rs12142704 | 0.84[EUR][1000 genomes] |
rs12567900 | 0.89[ASN][1000 genomes] |
rs17419032 | 0.82[EUR][1000 genomes] |
rs2297908 | 0.90[ASN][1000 genomes] |
rs2297909 | 0.88[AFR][1000 genomes];0.97[AMR][1000 genomes];0.96[EUR][1000 genomes];0.88[ASN][1000 genomes] |
rs2297913 | 0.92[ASN][1000 genomes] |
rs296559 | 0.92[ASN][1000 genomes] |
rs296560 | 0.93[ASN][1000 genomes] |
rs296570 | 0.94[ASN][1000 genomes] |
rs3208703 | 0.88[EUR][1000 genomes] |
rs34873729 | 0.87[EUR][1000 genomes] |
rs55757739 | 0.83[EUR][1000 genomes] |
rs55862304 | 0.82[EUR][1000 genomes] |
rs72749166 | 0.83[EUR][1000 genomes] |
rs7535723 | 0.92[AMR][1000 genomes];0.96[EUR][1000 genomes];0.87[ASN][1000 genomes] |
rs7539693 | 0.84[EUR][1000 genomes] |
Symbol | Regulation type |
---|---|
ASCL5 | Distal transcriptional regulation |
KIF21B | RNA binding protein mediated regulation |
Proximal transcriptional regulation

Distal transcriptional regulation

Post-transcriptional regulation:within mature miRNA

Post-transcriptional regulation: associated with RNA binding protein

Copyright: Bioinformatics Lab, Institute of Psychology, Chinese Academy of Sciences Feedback
Last update: March 26, 2014