SNP Report

Basic Infomation

LD-proxy of rSNPs(r²>0.8) (count: 19)

The LD data used here is based on HapMap rel#27 and 1000 Genomes phase I data. LD SNP pairs were selected with a threshold r² >=0.8.

rs_ID	r²[population][source]
rs10920083	0.97[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];0.97[ASN][1000 genomes]
rs10920087	0.88[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];0.97[ASN][1000 genomes]
rs10920091	0.93[JPT][hapmap];0.83[ASN][1000 genomes]
rs11584527	0.90[JPT][hapmap];0.85[AMR][1000 genomes];0.84[ASN][1000 genomes]
rs12081096	1.00[YRI][hapmap]
rs12563240	0.85[AMR][1000 genomes]
rs12567900	1.00[CEU][hapmap];0.93[CHB][hapmap];0.91[JPT][hapmap];0.95[AMR][1000 genomes];0.96[ASN][1000 genomes]
rs2221581	0.81[ASN][1000 genomes]
rs2297908	1.00[CEU][hapmap];1.00[CHB][hapmap];1.00[JPT][hapmap];1.00[YRI][hapmap];0.97[AFR][1000 genomes];0.95[AMR][1000 genomes];1.00[EUR][1000 genomes];0.97[ASN][1000 genomes]
rs2297909	1.00[CHB][hapmap];1.00[JPT][hapmap];0.91[ASN][1000 genomes]
rs2297913	0.95[AMR][1000 genomes];0.95[ASN][1000 genomes]
rs296543	1.00[JPT][hapmap]
rs296559	1.00[CHB][hapmap];1.00[JPT][hapmap];1.00[AMR][1000 genomes];0.99[ASN][1000 genomes]
rs296563	0.93[ASN][1000 genomes]
rs296570	1.00[CEU][hapmap];1.00[CHB][hapmap];1.00[JPT][hapmap];0.95[AMR][1000 genomes];0.97[ASN][1000 genomes]
rs3767496	0.93[JPT][hapmap]
rs404339	0.81[CHB][hapmap];1.00[JPT][hapmap]
rs61817964	0.80[ASN][1000 genomes]
rs7535723	0.89[ASN][1000 genomes]

rSNP related genes

Symbol	Regulation type
CAMSAP2	Distal transcriptional regulation
KIF21B	RNA binding protein mediated regulation

rSNP related regulatory elements

eQTL evidence (count: 0)