SNP Report

Basic Infomation

Name	rs2093146 dbSNP
Location	chr:20,30863021
Allele	G/T

LD-proxy of rSNPs(r²>0.8) (count: 53)

The LD data used here is based on HapMap rel#27 and 1000 Genomes phase I data. LD SNP pairs were selected with a threshold r² >=0.8.

rs_ID	r²[population][source]
rs1028563	0.82[EUR][1000 genomes]
rs11699120	0.80[EUR][1000 genomes]
rs11905172	0.82[ASN][1000 genomes]
rs13037142	0.82[EUR][1000 genomes]
rs1412997	0.80[EUR][1000 genomes]
rs14353	0.80[EUR][1000 genomes]
rs1984792	1.00[AFR][1000 genomes];0.93[AMR][1000 genomes];0.97[EUR][1000 genomes];0.94[ASN][1000 genomes]
rs2151437	0.82[EUR][1000 genomes]
rs2208131	0.80[EUR][1000 genomes]
rs2295454	0.80[EUR][1000 genomes]
rs34315674	0.81[ASN][1000 genomes]
rs35290636	0.92[AFR][1000 genomes];0.96[AMR][1000 genomes];0.96[EUR][1000 genomes];0.92[ASN][1000 genomes]
rs3746606	0.82[EUR][1000 genomes]
rs3787372	0.82[ASN][1000 genomes]
rs3787373	0.92[AFR][1000 genomes];0.96[AMR][1000 genomes];0.96[EUR][1000 genomes];0.92[ASN][1000 genomes]
rs3803989	0.82[ASN][1000 genomes]
rs3803990	0.82[ASN][1000 genomes]
rs3818219	0.80[ASN][1000 genomes]
rs4493341	0.86[AMR][1000 genomes];0.91[EUR][1000 genomes];0.83[ASN][1000 genomes]
rs4911088	0.92[AMR][1000 genomes];0.99[EUR][1000 genomes];0.96[ASN][1000 genomes]
rs4911089	0.98[AFR][1000 genomes];0.96[AMR][1000 genomes];0.97[EUR][1000 genomes];0.91[ASN][1000 genomes]
rs58921650	0.82[AMR][1000 genomes];0.89[EUR][1000 genomes]
rs6058556	0.82[ASN][1000 genomes]
rs6087835	0.80[ASN][1000 genomes]
rs6087839	0.80[ASN][1000 genomes]
rs6087845	0.83[ASN][1000 genomes]
rs6087862	0.90[ASN][1000 genomes]
rs6089216	0.82[ASN][1000 genomes]
rs6119231	0.81[ASN][1000 genomes]
rs6119776	0.82[ASN][1000 genomes]
rs6119777	0.82[ASN][1000 genomes]
rs6119784	0.80[ASN][1000 genomes]
rs6119792	0.83[ASN][1000 genomes]
rs6121388	0.82[ASN][1000 genomes]
rs6141277	0.84[EUR][1000 genomes];0.81[ASN][1000 genomes]
rs6141289	0.82[EUR][1000 genomes]
rs6141292	0.80[EUR][1000 genomes]
rs6141293	0.80[EUR][1000 genomes]
rs6141294	0.80[EUR][1000 genomes]
rs6141636	0.84[ASN][1000 genomes]
rs6141639	0.80[EUR][1000 genomes]
rs6141646	0.85[EUR][1000 genomes];0.81[ASN][1000 genomes]
rs6141657	0.98[AFR][1000 genomes];0.98[AMR][1000 genomes];0.98[EUR][1000 genomes];0.91[ASN][1000 genomes]
rs6141659	0.93[AMR][1000 genomes];0.96[EUR][1000 genomes];0.92[ASN][1000 genomes]
rs6141666	0.86[AMR][1000 genomes];0.90[EUR][1000 genomes];0.82[ASN][1000 genomes]
rs6141680	0.80[EUR][1000 genomes]
rs6141681	0.80[EUR][1000 genomes]
rs6141682	0.80[EUR][1000 genomes]
rs6141685	0.80[EUR][1000 genomes]
rs6141687	0.80[EUR][1000 genomes]
rs62206870	0.80[EUR][1000 genomes]
rs62208761	0.92[AFR][1000 genomes];0.95[AMR][1000 genomes];0.96[EUR][1000 genomes];0.87[ASN][1000 genomes]
rs7273804	0.81[EUR][1000 genomes]

rSNP related genes

Symbol	Regulation type
KIF3B	Proximal transcriptional regulation

rSNP related regulatory elements

Proximal transcriptional regulation

Distal transcriptional regulation

Post-transcriptional regulation:within mature miRNA

Post-transcriptional regulation: associated with RNA binding protein

eQTL evidence (count: 0)