SNP Report

Basic Infomation

Name	rs6141666 dbSNP
Location	chr:20,30895762
Allele	C/G

LD-proxy of rSNPs(r²>0.8) (count: 39)

The LD data used here is based on HapMap rel#27 and 1000 Genomes phase I data. LD SNP pairs were selected with a threshold r² >=0.8.

rs_ID	r²[population][source]
rs1028563	0.82[AFR][1000 genomes];0.82[AMR][1000 genomes];0.88[EUR][1000 genomes];0.80[ASN][1000 genomes]
rs11699120	0.86[EUR][1000 genomes]
rs13037142	0.82[AFR][1000 genomes];0.82[AMR][1000 genomes];0.88[EUR][1000 genomes];0.82[ASN][1000 genomes]
rs1412997	0.86[EUR][1000 genomes]
rs1412998	0.86[EUR][1000 genomes]
rs14353	0.82[AMR][1000 genomes];0.86[EUR][1000 genomes]
rs1984792	0.86[AMR][1000 genomes];0.93[EUR][1000 genomes];0.83[ASN][1000 genomes]
rs2093146	0.86[AMR][1000 genomes];0.90[EUR][1000 genomes];0.82[ASN][1000 genomes]
rs2151437	0.88[EUR][1000 genomes]
rs2208131	0.86[EUR][1000 genomes]
rs2295454	0.86[EUR][1000 genomes]
rs35290636	0.82[AFR][1000 genomes];0.90[AMR][1000 genomes];0.94[EUR][1000 genomes];0.87[ASN][1000 genomes]
rs3746606	0.82[AFR][1000 genomes];0.82[AMR][1000 genomes];0.88[EUR][1000 genomes];0.82[ASN][1000 genomes]
rs3787373	0.82[AFR][1000 genomes];0.90[AMR][1000 genomes];0.94[EUR][1000 genomes];0.87[ASN][1000 genomes]
rs4493341	0.96[AFR][1000 genomes];1.00[AMR][1000 genomes];0.99[EUR][1000 genomes];0.99[ASN][1000 genomes]
rs4575791	0.82[EUR][1000 genomes]
rs4911088	0.81[AMR][1000 genomes];0.91[EUR][1000 genomes];0.82[ASN][1000 genomes]
rs4911089	0.90[AMR][1000 genomes];0.93[EUR][1000 genomes];0.92[ASN][1000 genomes]
rs58921650	0.96[AFR][1000 genomes];0.95[AMR][1000 genomes];0.99[EUR][1000 genomes];0.82[ASN][1000 genomes]
rs6087862	0.85[ASN][1000 genomes]
rs6141289	0.88[EUR][1000 genomes];0.82[ASN][1000 genomes]
rs6141291	0.85[EUR][1000 genomes]
rs6141292	0.86[EUR][1000 genomes]
rs6141293	0.86[EUR][1000 genomes]
rs6141294	0.86[EUR][1000 genomes]
rs6141302	0.82[EUR][1000 genomes]
rs6141657	0.86[AMR][1000 genomes];0.88[EUR][1000 genomes]
rs6141659	0.86[AMR][1000 genomes];0.94[EUR][1000 genomes];0.87[ASN][1000 genomes]
rs6141680	0.82[AMR][1000 genomes];0.86[EUR][1000 genomes]
rs6141681	0.86[EUR][1000 genomes]
rs6141682	0.86[EUR][1000 genomes]
rs6141685	0.86[EUR][1000 genomes]
rs6141687	0.86[EUR][1000 genomes]
rs6141689	0.86[EUR][1000 genomes]
rs6141701	0.82[EUR][1000 genomes]
rs62206870	0.86[EUR][1000 genomes]
rs62208761	0.84[AMR][1000 genomes];0.86[EUR][1000 genomes]
rs7273804	0.87[EUR][1000 genomes];0.81[ASN][1000 genomes]
rs9798511	0.83[EUR][1000 genomes]

rSNP related genes

Symbol	Regulation type
KIF3B	Proximal transcriptional regulation

rSNP related regulatory elements

Proximal transcriptional regulation

Distal transcriptional regulation

Post-transcriptional regulation:within mature miRNA

Post-transcriptional regulation: associated with RNA binding protein

eQTL evidence (count: 0)