SNP Report

Basic Infomation

Name	rs35290636 dbSNP
Location	chr:20,30872803
Allele	C/T

LD-proxy of rSNPs(r²>0.8) (count: 39)

The LD data used here is based on HapMap rel#27 and 1000 Genomes phase I data. LD SNP pairs were selected with a threshold r² >=0.8.

rs_ID	r²[population][source]
rs1028563	0.86[EUR][1000 genomes];0.83[ASN][1000 genomes]
rs1029116	0.81[ASN][1000 genomes]
rs11699120	0.84[EUR][1000 genomes];0.80[ASN][1000 genomes]
rs13037142	0.86[EUR][1000 genomes];0.84[ASN][1000 genomes]
rs1412997	0.84[EUR][1000 genomes]
rs1412998	0.83[EUR][1000 genomes];0.81[ASN][1000 genomes]
rs14353	0.84[EUR][1000 genomes];0.80[ASN][1000 genomes]
rs1984792	0.92[AFR][1000 genomes];0.96[AMR][1000 genomes];0.99[EUR][1000 genomes];0.93[ASN][1000 genomes]
rs2093146	0.92[AFR][1000 genomes];0.96[AMR][1000 genomes];0.96[EUR][1000 genomes];0.92[ASN][1000 genomes]
rs2151437	0.86[EUR][1000 genomes];0.80[ASN][1000 genomes]
rs2208131	0.84[EUR][1000 genomes];0.81[ASN][1000 genomes]
rs2295454	0.84[EUR][1000 genomes];0.81[ASN][1000 genomes]
rs3746606	0.86[EUR][1000 genomes];0.84[ASN][1000 genomes]
rs3787373	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs4493341	0.85[AFR][1000 genomes];0.90[AMR][1000 genomes];0.94[EUR][1000 genomes];0.87[ASN][1000 genomes]
rs4911088	0.91[AMR][1000 genomes];0.97[EUR][1000 genomes];0.92[ASN][1000 genomes]
rs4911089	0.91[AFR][1000 genomes];1.00[AMR][1000 genomes];0.98[EUR][1000 genomes];0.90[ASN][1000 genomes]
rs58921650	0.85[AFR][1000 genomes];0.85[AMR][1000 genomes];0.93[EUR][1000 genomes];0.82[ASN][1000 genomes]
rs6087862	0.98[ASN][1000 genomes]
rs6141277	0.82[EUR][1000 genomes]
rs6141289	0.86[EUR][1000 genomes];0.84[ASN][1000 genomes]
rs6141291	0.82[EUR][1000 genomes]
rs6141292	0.84[EUR][1000 genomes];0.80[ASN][1000 genomes]
rs6141293	0.84[EUR][1000 genomes]
rs6141294	0.84[EUR][1000 genomes];0.81[ASN][1000 genomes]
rs6141646	0.81[EUR][1000 genomes]
rs6141657	0.94[AFR][1000 genomes];0.96[AMR][1000 genomes];0.94[EUR][1000 genomes];0.87[ASN][1000 genomes]
rs6141659	0.97[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs6141666	0.82[AFR][1000 genomes];0.90[AMR][1000 genomes];0.94[EUR][1000 genomes];0.87[ASN][1000 genomes]
rs6141680	0.84[EUR][1000 genomes];0.80[ASN][1000 genomes]
rs6141681	0.84[EUR][1000 genomes]
rs6141682	0.84[EUR][1000 genomes];0.80[ASN][1000 genomes]
rs6141685	0.84[EUR][1000 genomes]
rs6141687	0.84[EUR][1000 genomes]
rs6141689	0.83[EUR][1000 genomes];0.81[ASN][1000 genomes]
rs62206870	0.84[EUR][1000 genomes]
rs62208761	0.92[AFR][1000 genomes];0.94[AMR][1000 genomes];0.92[EUR][1000 genomes];0.83[ASN][1000 genomes]
rs7273804	0.82[EUR][1000 genomes]
rs9798511	0.81[EUR][1000 genomes]

rSNP related genes

Symbol	Regulation type
KIF3B	Distal transcriptional regulation
ENSG00000264308	Distal transcriptional regulation

rSNP related regulatory elements

Proximal transcriptional regulation

Distal transcriptional regulation

Post-transcriptional regulation:within mature miRNA

Post-transcriptional regulation: associated with RNA binding protein

eQTL evidence (count: 0)