SNP Report

Basic Infomation

Name	rs58921650 dbSNP
Location	chr:20,30893903
Allele	A/G

LD-proxy of rSNPs(r²>0.8) (count: 39)

The LD data used here is based on HapMap rel#27 and 1000 Genomes phase I data. LD SNP pairs were selected with a threshold r² >=0.8.

rs_ID	r²[population][source]
rs1028563	0.85[AFR][1000 genomes];0.87[EUR][1000 genomes]
rs11699120	0.85[EUR][1000 genomes]
rs13037142	0.85[AFR][1000 genomes];0.87[EUR][1000 genomes]
rs1412997	0.85[EUR][1000 genomes]
rs1412998	0.85[EUR][1000 genomes]
rs14353	0.85[EUR][1000 genomes]
rs1984792	0.88[AMR][1000 genomes];0.92[EUR][1000 genomes]
rs2093146	0.82[AMR][1000 genomes];0.89[EUR][1000 genomes]
rs2151437	0.87[EUR][1000 genomes]
rs2208131	0.85[EUR][1000 genomes]
rs2295454	0.85[EUR][1000 genomes]
rs35290636	0.85[AFR][1000 genomes];0.85[AMR][1000 genomes];0.93[EUR][1000 genomes];0.82[ASN][1000 genomes]
rs3746606	0.85[AFR][1000 genomes];0.87[EUR][1000 genomes]
rs3787373	0.85[AFR][1000 genomes];0.85[AMR][1000 genomes];0.93[EUR][1000 genomes];0.82[ASN][1000 genomes]
rs4493341	1.00[AFR][1000 genomes];0.95[AMR][1000 genomes];0.98[EUR][1000 genomes];0.81[ASN][1000 genomes]
rs4575791	0.81[EUR][1000 genomes]
rs4911088	0.83[AMR][1000 genomes];0.90[EUR][1000 genomes]
rs4911089	0.85[AMR][1000 genomes];0.92[EUR][1000 genomes]
rs6087862	0.81[ASN][1000 genomes]
rs6141289	0.87[EUR][1000 genomes]
rs6141291	0.84[EUR][1000 genomes]
rs6141292	0.85[EUR][1000 genomes]
rs6141293	0.85[EUR][1000 genomes]
rs6141294	0.85[EUR][1000 genomes]
rs6141302	0.82[EUR][1000 genomes]
rs6141657	0.82[AMR][1000 genomes];0.87[EUR][1000 genomes]
rs6141659	0.82[AMR][1000 genomes];0.93[EUR][1000 genomes];0.82[ASN][1000 genomes]
rs6141666	0.96[AFR][1000 genomes];0.95[AMR][1000 genomes];0.99[EUR][1000 genomes];0.82[ASN][1000 genomes]
rs6141680	0.85[EUR][1000 genomes]
rs6141681	0.85[EUR][1000 genomes]
rs6141682	0.85[EUR][1000 genomes]
rs6141685	0.85[EUR][1000 genomes]
rs6141687	0.85[EUR][1000 genomes]
rs6141689	0.85[EUR][1000 genomes]
rs6141701	0.82[EUR][1000 genomes]
rs62206870	0.85[EUR][1000 genomes]
rs62208761	0.85[EUR][1000 genomes]
rs7273804	0.86[EUR][1000 genomes]
rs9798511	0.82[EUR][1000 genomes]

rSNP related genes

Symbol	Regulation type
KIF3B	Proximal transcriptional regulation
KIF3B	Distal transcriptional regulation

rSNP related regulatory elements

Proximal transcriptional regulation

Distal transcriptional regulation

Post-transcriptional regulation:within mature miRNA

Post-transcriptional regulation: associated with RNA binding protein

eQTL evidence (count: 0)