SNP Report

Basic Infomation

Name	rs1792952 dbSNP
Location	chr:11,61894280
Allele	T/C

LD-proxy of rSNPs(r²>0.8) (count: 30)

The LD data used here is based on HapMap rel#27 and 1000 Genomes phase I data. LD SNP pairs were selected with a threshold r² >=0.8.

rs_ID	r²[population][source]
rs11230911	0.97[ASN][1000 genomes]
rs11230914	1.00[ASN][1000 genomes]
rs11230915	0.93[EUR][1000 genomes]
rs11230917	0.96[AMR][1000 genomes];0.96[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs12361901	0.93[EUR][1000 genomes]
rs12803399	0.97[ASN][1000 genomes]
rs1630011	0.96[AFR][1000 genomes];0.99[AMR][1000 genomes];0.97[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs1675128	0.97[AFR][1000 genomes];0.98[AMR][1000 genomes];0.97[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs1675129	0.97[AFR][1000 genomes];0.97[AMR][1000 genomes];0.97[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs1792948	0.82[AMR][1000 genomes];0.81[EUR][1000 genomes]
rs1792949	0.88[AMR][1000 genomes];0.89[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs1792950	0.91[AMR][1000 genomes];0.96[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs1792951	0.97[AMR][1000 genomes];0.97[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs3758966	0.85[AFR][1000 genomes];0.90[AMR][1000 genomes];0.93[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs3758967	0.94[AFR][1000 genomes];0.97[AMR][1000 genomes];0.96[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs3758968	0.95[AFR][1000 genomes];0.92[AMR][1000 genomes];0.91[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs3758969	0.96[AFR][1000 genomes];0.91[AMR][1000 genomes];0.90[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs3853615	0.87[EUR][1000 genomes]
rs3862389	0.93[EUR][1000 genomes]
rs3862390	0.93[EUR][1000 genomes]
rs3867137	0.96[AMR][1000 genomes];0.96[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs4144906	0.92[EUR][1000 genomes]
rs4963286	0.97[ASN][1000 genomes]
rs4963461	0.97[ASN][1000 genomes]
rs4963462	0.97[ASN][1000 genomes]
rs7102807	0.93[EUR][1000 genomes]
rs7122395	0.92[EUR][1000 genomes]
rs7924462	0.90[EUR][1000 genomes]
rs7927359	0.98[AFR][1000 genomes];0.98[AMR][1000 genomes];0.98[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs7952545	0.98[AFR][1000 genomes];0.96[AMR][1000 genomes];0.96[EUR][1000 genomes];1.00[ASN][1000 genomes]

rSNP related genes

Symbol	Regulation type
INCENP	Proximal transcriptional regulation
FTH1	Distal transcriptional regulation
ENSG00000269089	Distal transcriptional regulation

rSNP related regulatory elements

Proximal transcriptional regulation

Distal transcriptional regulation

Post-transcriptional regulation:within mature miRNA

Post-transcriptional regulation: associated with RNA binding protein

eQTL evidence (count: 0)