SNP Report
Basic Infomation
| Name | rs11230911 dbSNP |
|---|---|
| Location | chr:11,61888275 |
| Allele | C/G |
LD-proxy of rSNPs(r2>0.8) (count: 28)
The LD data used here is based on HapMap rel#27 and 1000 Genomes phase I data. LD SNP pairs were selected with a threshold r2 >=0.8.
| rs_ID | r2[population][source] |
|---|---|
| rs11230914 | 0.96[AMR][1000 genomes];0.99[EUR][1000 genomes];0.97[ASN][1000 genomes] |
| rs11230915 | 0.82[EUR][1000 genomes] |
| rs11230917 | 0.81[AMR][1000 genomes];0.80[EUR][1000 genomes];0.97[ASN][1000 genomes] |
| rs12361901 | 0.82[EUR][1000 genomes] |
| rs12803399 | 1.00[ASN][1000 genomes] |
| rs1630011 | 0.97[ASN][1000 genomes] |
| rs1675128 | 0.97[ASN][1000 genomes] |
| rs1675129 | 0.97[ASN][1000 genomes] |
| rs1792949 | 0.97[ASN][1000 genomes] |
| rs1792950 | 0.97[ASN][1000 genomes] |
| rs1792951 | 0.82[AMR][1000 genomes];0.97[ASN][1000 genomes] |
| rs1792952 | 0.97[ASN][1000 genomes] |
| rs3758966 | 0.97[ASN][1000 genomes] |
| rs3758967 | 0.97[ASN][1000 genomes] |
| rs3758968 | 0.97[ASN][1000 genomes] |
| rs3758969 | 0.97[ASN][1000 genomes] |
| rs3862389 | 0.82[EUR][1000 genomes] |
| rs3862390 | 0.82[EUR][1000 genomes] |
| rs3867137 | 0.81[AMR][1000 genomes];0.80[EUR][1000 genomes];0.97[ASN][1000 genomes] |
| rs4144906 | 0.81[EUR][1000 genomes] |
| rs4963286 | 1.00[ASN][1000 genomes] |
| rs4963461 | 1.00[ASN][1000 genomes] |
| rs4963462 | 1.00[ASN][1000 genomes] |
| rs7102807 | 0.82[EUR][1000 genomes] |
| rs7122395 | 0.83[EUR][1000 genomes] |
| rs7924462 | 0.81[EUR][1000 genomes] |
| rs7927359 | 0.97[ASN][1000 genomes] |
| rs7952545 | 0.97[ASN][1000 genomes] |
rSNP related genes
| Symbol | Regulation type |
|---|---|
| INCENP | Proximal transcriptional regulation |
rSNP related regulatory elements
Proximal transcriptional regulation
Distal transcriptional regulation
Post-transcriptional regulation:within mature miRNA
Post-transcriptional regulation: associated with RNA binding protein
eQTL evidence (count: 0)
Copyright: Bioinformatics Lab, Institute of Psychology, Chinese Academy of Sciences Feedback
Last update: March 26, 2014