SNP Report

Basic Infomation

Name	rs3853615 dbSNP
Location	chr:11,61889063
Allele	T/C

LD-proxy of rSNPs(r²>0.8) (count: 49)

The LD data used here is based on HapMap rel#27 and 1000 Genomes phase I data. LD SNP pairs were selected with a threshold r² >=0.8.

rs_ID	r²[population][source]
rs11230910	1.00[ASN][1000 genomes]
rs11230915	1.00[AFR][1000 genomes];0.94[AMR][1000 genomes];0.93[EUR][1000 genomes];0.98[ASN][1000 genomes]
rs11230917	0.90[EUR][1000 genomes]
rs11602251	1.00[ASN][1000 genomes]
rs11602735	1.00[ASN][1000 genomes]
rs11606529	1.00[ASN][1000 genomes]
rs11606620	1.00[ASN][1000 genomes]
rs12361901	1.00[AFR][1000 genomes];0.94[AMR][1000 genomes];0.93[EUR][1000 genomes];0.98[ASN][1000 genomes]
rs12787787	1.00[ASN][1000 genomes]
rs12808841	1.00[ASN][1000 genomes]
rs1630011	0.89[EUR][1000 genomes]
rs1675128	0.89[EUR][1000 genomes]
rs1675129	0.89[EUR][1000 genomes]
rs1792949	0.81[EUR][1000 genomes]
rs1792950	0.87[EUR][1000 genomes]
rs1792951	0.89[EUR][1000 genomes]
rs1792952	0.87[EUR][1000 genomes]
rs2868724	1.00[ASN][1000 genomes]
rs2868768	1.00[ASN][1000 genomes]
rs34283369	1.00[ASN][1000 genomes]
rs35029162	1.00[ASN][1000 genomes]
rs35609425	1.00[ASN][1000 genomes]
rs3758966	0.90[EUR][1000 genomes]
rs3758967	0.89[EUR][1000 genomes]
rs3758968	0.92[EUR][1000 genomes]
rs3758969	0.93[EUR][1000 genomes]
rs3862389	1.00[AFR][1000 genomes];0.94[AMR][1000 genomes];0.94[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs3862390	1.00[AFR][1000 genomes];0.94[AMR][1000 genomes];0.94[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs3867135	0.80[AFR][1000 genomes];0.84[EUR][1000 genomes]
rs3867137	0.90[EUR][1000 genomes]
rs3898903	1.00[ASN][1000 genomes]
rs3898904	1.00[ASN][1000 genomes]
rs3972405	1.00[ASN][1000 genomes]
rs4144906	0.99[AFR][1000 genomes];0.91[AMR][1000 genomes];0.92[EUR][1000 genomes];0.98[ASN][1000 genomes]
rs4963285	1.00[ASN][1000 genomes]
rs4963459	1.00[ASN][1000 genomes]
rs4963460	1.00[ASN][1000 genomes]
rs56275805	1.00[ASN][1000 genomes]
rs7102807	1.00[AFR][1000 genomes];0.94[AMR][1000 genomes];0.93[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs7122395	0.98[AFR][1000 genomes];0.95[AMR][1000 genomes];0.93[EUR][1000 genomes];0.98[ASN][1000 genomes]
rs7924462	0.99[AFR][1000 genomes];0.91[AMR][1000 genomes];0.92[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs7924531	1.00[ASN][1000 genomes]
rs7924786	1.00[ASN][1000 genomes]
rs7924923	1.00[ASN][1000 genomes]
rs7927359	0.89[EUR][1000 genomes]
rs7930687	1.00[ASN][1000 genomes]
rs7935766	1.00[ASN][1000 genomes]
rs7946226	0.98[ASN][1000 genomes]
rs7952545	0.87[EUR][1000 genomes]

rSNP related genes

Symbol	Regulation type
INCENP	Proximal transcriptional regulation

rSNP related regulatory elements

Proximal transcriptional regulation

Distal transcriptional regulation

Post-transcriptional regulation:within mature miRNA

Post-transcriptional regulation: associated with RNA binding protein

eQTL evidence (count: 0)