SNP Report

Basic Infomation

Name	rs17884637 dbSNP
Location	chr:10,81687922
Allele	G/C

LD-proxy of rSNPs(r²>0.8) (count: 51)

The LD data used here is based on HapMap rel#27 and 1000 Genomes phase I data. LD SNP pairs were selected with a threshold r² >=0.8.

rs_ID	r²[population][source]
rs1054054	0.86[AFR][1000 genomes];0.92[AMR][1000 genomes];0.90[EUR][1000 genomes];0.92[ASN][1000 genomes]
rs11199111	0.84[ASN][1000 genomes]
rs11199535	0.84[ASN][1000 genomes]
rs11200145	0.84[ASN][1000 genomes]
rs12411407	0.81[AMR][1000 genomes]
rs12411479	0.87[AMR][1000 genomes]
rs12412226	0.94[AMR][1000 genomes];0.85[EUR][1000 genomes]
rs12413678	1.00[AFR][1000 genomes];0.91[AMR][1000 genomes];0.92[ASN][1000 genomes]
rs12413715	1.00[AFR][1000 genomes];0.98[AMR][1000 genomes];0.98[EUR][1000 genomes];0.92[ASN][1000 genomes]
rs12414096	0.98[AMR][1000 genomes];0.88[EUR][1000 genomes]
rs12414616	1.00[AMR][1000 genomes];0.98[EUR][1000 genomes];0.92[ASN][1000 genomes]
rs12414891	1.00[AMR][1000 genomes];0.94[EUR][1000 genomes];0.92[ASN][1000 genomes]
rs12415523	1.00[AMR][1000 genomes];0.98[EUR][1000 genomes];0.92[ASN][1000 genomes]
rs12416493	0.94[AMR][1000 genomes];0.90[EUR][1000 genomes]
rs17879726	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes];0.90[EUR][1000 genomes]
rs17880086	1.00[AMR][1000 genomes];0.86[EUR][1000 genomes]
rs17881828	1.00[AMR][1000 genomes];0.92[EUR][1000 genomes];0.84[ASN][1000 genomes]
rs17883671	1.00[AMR][1000 genomes];0.98[EUR][1000 genomes];0.92[ASN][1000 genomes]
rs17885031	1.00[AMR][1000 genomes];0.92[EUR][1000 genomes];0.84[ASN][1000 genomes]
rs17886286	0.86[EUR][1000 genomes]
rs1923534	0.98[AMR][1000 genomes];0.90[EUR][1000 genomes]
rs1983775	0.83[AMR][1000 genomes];0.94[EUR][1000 genomes];0.92[ASN][1000 genomes]
rs1983776	0.83[AMR][1000 genomes];0.94[EUR][1000 genomes];0.92[ASN][1000 genomes]
rs2025197	0.92[ASN][1000 genomes]
rs3088308	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes];0.90[EUR][1000 genomes]
rs41298231	0.92[AMR][1000 genomes];0.90[EUR][1000 genomes];0.92[ASN][1000 genomes]
rs41309986	0.92[AMR][1000 genomes];0.90[EUR][1000 genomes];0.92[ASN][1000 genomes]
rs4387301	0.94[AMR][1000 genomes];0.90[EUR][1000 genomes]
rs4520539	0.94[AMR][1000 genomes];0.90[EUR][1000 genomes]
rs4522114	0.84[ASN][1000 genomes]
rs45558131	0.92[ASN][1000 genomes]
rs55665833	0.84[AMR][1000 genomes];0.83[ASN][1000 genomes]
rs55729226	0.80[AMR][1000 genomes];0.83[ASN][1000 genomes]
rs55835350	0.87[AMR][1000 genomes]
rs55836366	0.92[ASN][1000 genomes]
rs56122289	0.89[AMR][1000 genomes]
rs56198874	0.96[AMR][1000 genomes];0.98[EUR][1000 genomes];0.92[ASN][1000 genomes]
rs56235549	0.81[AMR][1000 genomes]
rs61859008	0.81[AMR][1000 genomes]
rs61859762	0.92[AMR][1000 genomes];0.94[EUR][1000 genomes];0.92[ASN][1000 genomes]
rs61859763	0.85[AMR][1000 genomes];0.92[EUR][1000 genomes];0.92[ASN][1000 genomes]
rs61859766	0.92[AMR][1000 genomes];0.90[EUR][1000 genomes];0.92[ASN][1000 genomes]
rs61859793	0.86[AMR][1000 genomes];0.92[ASN][1000 genomes]
rs61860417	0.90[AMR][1000 genomes];0.90[EUR][1000 genomes]
rs61860420	0.94[AMR][1000 genomes];0.90[EUR][1000 genomes]
rs61860421	0.94[AMR][1000 genomes];0.90[EUR][1000 genomes]
rs723191	0.89[AMR][1000 genomes];0.90[EUR][1000 genomes]
rs723193	0.89[AMR][1000 genomes];0.90[EUR][1000 genomes]
rs726289	0.89[AMR][1000 genomes];0.90[EUR][1000 genomes]
rs7902075	0.94[AMR][1000 genomes];0.86[EUR][1000 genomes]
rs7908551	0.84[ASN][1000 genomes]

rSNP related genes

Symbol	Regulation type
MBL1P	Proximal transcriptional regulation
MBL1P	RNA binding protein mediated regulation

rSNP related regulatory elements

Proximal transcriptional regulation

Distal transcriptional regulation

Post-transcriptional regulation:within mature miRNA

Post-transcriptional regulation: associated with RNA binding protein

eQTL evidence (count: 0)