SNP Report

Basic Infomation

Name	rs11199535 dbSNP
Location	chr:10,81664177
Allele	G/T

LD-proxy of rSNPs(r²>0.8) (count: 51)

The LD data used here is based on HapMap rel#27 and 1000 Genomes phase I data. LD SNP pairs were selected with a threshold r² >=0.8.

rs_ID	r²[population][source]
rs1051246	1.00[CHB][hapmap];1.00[JPT][hapmap]
rs1054054	1.00[CHB][hapmap];1.00[JPT][hapmap];0.92[ASN][1000 genomes]
rs11199111	0.87[AFR][1000 genomes];0.92[AMR][1000 genomes];0.98[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs11200145	0.90[AMR][1000 genomes];0.98[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs12413653	1.00[CHB][hapmap];1.00[JPT][hapmap]
rs12413678	1.00[CHB][hapmap];1.00[JPT][hapmap];0.92[ASN][1000 genomes]
rs12413715	1.00[CHB][hapmap];1.00[JPT][hapmap];0.92[ASN][1000 genomes]
rs12414616	1.00[CHB][hapmap];1.00[JPT][hapmap];0.92[ASN][1000 genomes]
rs12414891	1.00[CHB][hapmap];1.00[JPT][hapmap];0.92[ASN][1000 genomes]
rs12415523	1.00[CHB][hapmap];1.00[JPT][hapmap];0.92[ASN][1000 genomes]
rs1537835	1.00[CHB][hapmap];1.00[JPT][hapmap]
rs17098720	1.00[CHB][hapmap];1.00[JPT][hapmap]
rs17606361	1.00[CHB][hapmap];1.00[JPT][hapmap]
rs17881828	0.84[ASN][1000 genomes]
rs17883671	0.92[ASN][1000 genomes]
rs17884637	0.84[ASN][1000 genomes]
rs17885031	0.84[ASN][1000 genomes]
rs1923534	1.00[CHB][hapmap];1.00[JPT][hapmap]
rs1983775	1.00[CHB][hapmap];1.00[JPT][hapmap];0.92[ASN][1000 genomes]
rs1983776	1.00[CHB][hapmap];1.00[JPT][hapmap];0.92[ASN][1000 genomes]
rs2025197	0.95[EUR][1000 genomes];0.92[ASN][1000 genomes]
rs3088308	1.00[CHB][hapmap];1.00[JPT][hapmap]
rs34572672	0.92[ASN][1000 genomes]
rs41298231	0.92[ASN][1000 genomes]
rs41309986	0.92[ASN][1000 genomes]
rs4342971	0.92[ASN][1000 genomes]
rs4520539	1.00[CHB][hapmap];1.00[JPT][hapmap]
rs4522114	0.94[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs45558131	0.92[ASN][1000 genomes]
rs55665833	0.83[ASN][1000 genomes]
rs55729226	0.83[ASN][1000 genomes]
rs55836366	0.85[AMR][1000 genomes];0.92[EUR][1000 genomes];0.92[ASN][1000 genomes]
rs56198874	0.92[ASN][1000 genomes]
rs61859762	0.92[ASN][1000 genomes]
rs61859763	0.92[ASN][1000 genomes]
rs61859766	0.92[ASN][1000 genomes]
rs61859793	0.92[ASN][1000 genomes]
rs7072068	1.00[CHB][hapmap];1.00[JPT][hapmap];0.92[ASN][1000 genomes]
rs7072441	1.00[CHB][hapmap];1.00[JPT][hapmap];0.92[ASN][1000 genomes]
rs7079303	0.92[ASN][1000 genomes]
rs7082500	0.92[ASN][1000 genomes]
rs7083964	1.00[JPT][hapmap]
rs7092802	0.92[ASN][1000 genomes]
rs723191	1.00[CHB][hapmap];1.00[JPT][hapmap]
rs723193	1.00[CHB][hapmap];1.00[JPT][hapmap]
rs726289	1.00[CHB][hapmap];1.00[JPT][hapmap]
rs728616	1.00[CHB][hapmap];1.00[JPT][hapmap]
rs7901746	0.92[ASN][1000 genomes]
rs7907311	1.00[CHB][hapmap];1.00[JPT][hapmap]
rs7908551	0.84[ASN][1000 genomes]
rs7924262	0.92[ASN][1000 genomes]

rSNP related genes

Symbol	Regulation type
MBL1P	Proximal transcriptional regulation

rSNP related regulatory elements

Proximal transcriptional regulation

Distal transcriptional regulation

Post-transcriptional regulation:within mature miRNA

Post-transcriptional regulation: associated with RNA binding protein

eQTL evidence (count: 0)