SNP Report

Basic Infomation

Name	rs61859766 dbSNP
Location	chr:10,81683040
Allele	G/A

LD-proxy of rSNPs(r²>0.8) (count: 68)

The LD data used here is based on HapMap rel#27 and 1000 Genomes phase I data. LD SNP pairs were selected with a threshold r² >=0.8.

rs_ID	r²[population][source]
rs1051246	0.82[ASN][1000 genomes]
rs1054054	0.86[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs11199111	0.92[ASN][1000 genomes]
rs11199535	0.92[ASN][1000 genomes]
rs11200145	0.92[ASN][1000 genomes]
rs12412226	0.86[AMR][1000 genomes]
rs12413653	0.82[ASN][1000 genomes]
rs12413678	0.83[AMR][1000 genomes];1.00[ASN][1000 genomes]
rs12413682	0.82[ASN][1000 genomes]
rs12413715	0.90[AMR][1000 genomes];0.92[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs12414096	0.90[AMR][1000 genomes];0.82[EUR][1000 genomes];0.82[ASN][1000 genomes]
rs12414616	0.92[AMR][1000 genomes];0.92[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs12414891	0.92[AMR][1000 genomes];0.96[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs12415083	0.82[ASN][1000 genomes]
rs12415523	0.92[AMR][1000 genomes];0.92[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs12416060	0.82[ASN][1000 genomes]
rs12416068	0.82[ASN][1000 genomes]
rs12416075	0.82[ASN][1000 genomes]
rs12416493	0.86[AMR][1000 genomes];0.84[EUR][1000 genomes];0.82[ASN][1000 genomes]
rs17879726	0.92[AMR][1000 genomes];0.84[EUR][1000 genomes];0.82[ASN][1000 genomes]
rs17880086	0.92[AMR][1000 genomes];0.88[EUR][1000 genomes];0.82[ASN][1000 genomes]
rs17881828	0.92[AMR][1000 genomes];0.86[EUR][1000 genomes];0.92[ASN][1000 genomes]
rs17883671	0.92[AMR][1000 genomes];0.92[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs17884637	0.92[AMR][1000 genomes];0.90[EUR][1000 genomes];0.92[ASN][1000 genomes]
rs17885031	0.92[AMR][1000 genomes];0.86[EUR][1000 genomes];0.92[ASN][1000 genomes]
rs17886286	0.88[EUR][1000 genomes]
rs17886630	0.82[ASN][1000 genomes]
rs1923534	0.90[AMR][1000 genomes];0.84[EUR][1000 genomes];0.82[ASN][1000 genomes]
rs1983775	0.91[AMR][1000 genomes];0.96[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs1983776	0.91[AMR][1000 genomes];0.96[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs2025197	1.00[ASN][1000 genomes]
rs3088308	0.92[AMR][1000 genomes];0.84[EUR][1000 genomes];0.82[ASN][1000 genomes]
rs34572672	0.84[ASN][1000 genomes]
rs41298231	1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs41309986	1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs4342971	0.84[ASN][1000 genomes]
rs4387301	0.86[AMR][1000 genomes];0.84[EUR][1000 genomes];0.82[ASN][1000 genomes]
rs4520539	0.86[AMR][1000 genomes];0.84[EUR][1000 genomes];0.82[ASN][1000 genomes]
rs4522114	0.92[ASN][1000 genomes]
rs45558131	1.00[ASN][1000 genomes]
rs55665833	0.84[AMR][1000 genomes];0.80[EUR][1000 genomes];0.91[ASN][1000 genomes]
rs55729226	0.80[AMR][1000 genomes];0.91[ASN][1000 genomes]
rs55836366	1.00[ASN][1000 genomes]
rs56122289	0.81[AMR][1000 genomes];0.82[ASN][1000 genomes]
rs56198874	0.96[AMR][1000 genomes];0.92[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs61859762	1.00[AMR][1000 genomes];0.96[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs61859763	0.92[AMR][1000 genomes];0.94[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs61859793	1.00[ASN][1000 genomes]
rs61860417	0.83[AMR][1000 genomes];0.84[EUR][1000 genomes];0.82[ASN][1000 genomes]
rs61860420	0.86[AMR][1000 genomes];0.84[EUR][1000 genomes];0.82[ASN][1000 genomes]
rs61860421	0.86[AMR][1000 genomes];0.84[EUR][1000 genomes]
rs61860423	0.82[ASN][1000 genomes]
rs61860424	0.82[ASN][1000 genomes]
rs7072068	0.84[ASN][1000 genomes]
rs7072441	0.84[ASN][1000 genomes]
rs7079303	0.84[ASN][1000 genomes]
rs7082500	0.84[ASN][1000 genomes]
rs7086876	0.82[ASN][1000 genomes]
rs7091280	0.82[ASN][1000 genomes]
rs7091430	0.82[ASN][1000 genomes]
rs7092802	0.84[ASN][1000 genomes]
rs723191	0.82[AMR][1000 genomes];0.84[EUR][1000 genomes];0.82[ASN][1000 genomes]
rs723193	0.82[AMR][1000 genomes];0.84[EUR][1000 genomes];0.82[ASN][1000 genomes]
rs726289	0.82[AMR][1000 genomes];0.84[EUR][1000 genomes];0.82[ASN][1000 genomes]
rs7901746	0.84[ASN][1000 genomes]
rs7902075	0.86[AMR][1000 genomes];0.81[EUR][1000 genomes]
rs7908551	0.92[ASN][1000 genomes]
rs7924262	0.84[ASN][1000 genomes]

rSNP related genes

Symbol	Regulation type
MBL1P	RNA binding protein mediated regulation

rSNP related regulatory elements

Proximal transcriptional regulation

Distal transcriptional regulation

Post-transcriptional regulation:within mature miRNA

Post-transcriptional regulation: associated with RNA binding protein

eQTL evidence (count: 0)