SNP Report
Name | rs1722765   dbSNP |
---|---|
Location | chr:1,201275149 |
Allele | C/G |
The LD data used here is based on HapMap rel#27 and 1000 Genomes phase I data. LD SNP pairs were selected with a threshold r2 >=0.8.
rs_ID | r2[population][source] |
---|---|
rs1543805 | 0.88[ASN][1000 genomes] |
rs1543806 | 0.88[ASN][1000 genomes] |
rs1626370 | 0.96[AMR][1000 genomes];0.96[EUR][1000 genomes];0.95[ASN][1000 genomes] |
rs1628151 | 0.96[AMR][1000 genomes];0.96[EUR][1000 genomes];0.95[ASN][1000 genomes] |
rs1628556 | 0.96[AMR][1000 genomes];0.96[EUR][1000 genomes];0.95[ASN][1000 genomes] |
rs1722742 | 0.94[AMR][1000 genomes];0.95[EUR][1000 genomes];0.94[ASN][1000 genomes] |
rs1722764 | 0.84[AFR][1000 genomes];0.94[AMR][1000 genomes];0.96[EUR][1000 genomes];0.95[ASN][1000 genomes] |
rs1772828 | 0.89[ASN][1000 genomes] |
rs1772832 | 0.96[AMR][1000 genomes];0.96[EUR][1000 genomes];0.95[ASN][1000 genomes] |
rs1772847 | 0.87[EUR][1000 genomes] |
rs1772848 | 0.87[EUR][1000 genomes] |
rs1779284 | 0.81[ASN][1000 genomes] |
rs1779289 | 0.92[AMR][1000 genomes];0.95[EUR][1000 genomes];0.95[ASN][1000 genomes] |
rs1779293 | 0.96[AMR][1000 genomes];0.96[EUR][1000 genomes];0.95[ASN][1000 genomes] |
rs2071960 | 0.89[ASN][1000 genomes] |
rs2239845 | 0.88[ASN][1000 genomes] |
rs832145 | 0.89[EUR][1000 genomes];0.88[ASN][1000 genomes] |
rs832146 | 0.89[EUR][1000 genomes];0.89[ASN][1000 genomes] |
rs832147 | 0.90[EUR][1000 genomes];0.89[ASN][1000 genomes] |
rs832148 | 0.89[EUR][1000 genomes];0.90[ASN][1000 genomes] |
rs832149 | 0.86[EUR][1000 genomes] |
rs832150 | 0.87[AFR][1000 genomes];0.93[AMR][1000 genomes];0.98[EUR][1000 genomes];0.95[ASN][1000 genomes] |
rs832151 | 0.93[AMR][1000 genomes];0.98[EUR][1000 genomes];0.83[ASN][1000 genomes] |
rs832152 | 0.96[AMR][1000 genomes];0.98[EUR][1000 genomes];0.95[ASN][1000 genomes] |
rs854505 | 0.82[ASN][1000 genomes] |
rs861272 | 0.80[EUR][1000 genomes] |
Symbol | Regulation type |
---|---|
TNNT2 | Distal transcriptional regulation |
Copyright: Bioinformatics Lab, Institute of Psychology, Chinese Academy of Sciences Feedback
Last update: March 26, 2014