SNP Report

Basic Infomation

Name	rs1722765 dbSNP
Location	chr:1,201275149
Allele	C/G

LD-proxy of rSNPs(r²>0.8) (count: 26)

The LD data used here is based on HapMap rel#27 and 1000 Genomes phase I data. LD SNP pairs were selected with a threshold r² >=0.8.

rs_ID	r²[population][source]
rs1543805	0.88[ASN][1000 genomes]
rs1543806	0.88[ASN][1000 genomes]
rs1626370	0.96[AMR][1000 genomes];0.96[EUR][1000 genomes];0.95[ASN][1000 genomes]
rs1628151	0.96[AMR][1000 genomes];0.96[EUR][1000 genomes];0.95[ASN][1000 genomes]
rs1628556	0.96[AMR][1000 genomes];0.96[EUR][1000 genomes];0.95[ASN][1000 genomes]
rs1722742	0.94[AMR][1000 genomes];0.95[EUR][1000 genomes];0.94[ASN][1000 genomes]
rs1722764	0.84[AFR][1000 genomes];0.94[AMR][1000 genomes];0.96[EUR][1000 genomes];0.95[ASN][1000 genomes]
rs1772828	0.89[ASN][1000 genomes]
rs1772832	0.96[AMR][1000 genomes];0.96[EUR][1000 genomes];0.95[ASN][1000 genomes]
rs1772847	0.87[EUR][1000 genomes]
rs1772848	0.87[EUR][1000 genomes]
rs1779284	0.81[ASN][1000 genomes]
rs1779289	0.92[AMR][1000 genomes];0.95[EUR][1000 genomes];0.95[ASN][1000 genomes]
rs1779293	0.96[AMR][1000 genomes];0.96[EUR][1000 genomes];0.95[ASN][1000 genomes]
rs2071960	0.89[ASN][1000 genomes]
rs2239845	0.88[ASN][1000 genomes]
rs832145	0.89[EUR][1000 genomes];0.88[ASN][1000 genomes]
rs832146	0.89[EUR][1000 genomes];0.89[ASN][1000 genomes]
rs832147	0.90[EUR][1000 genomes];0.89[ASN][1000 genomes]
rs832148	0.89[EUR][1000 genomes];0.90[ASN][1000 genomes]
rs832149	0.86[EUR][1000 genomes]
rs832150	0.87[AFR][1000 genomes];0.93[AMR][1000 genomes];0.98[EUR][1000 genomes];0.95[ASN][1000 genomes]
rs832151	0.93[AMR][1000 genomes];0.98[EUR][1000 genomes];0.83[ASN][1000 genomes]
rs832152	0.96[AMR][1000 genomes];0.98[EUR][1000 genomes];0.95[ASN][1000 genomes]
rs854505	0.82[ASN][1000 genomes]
rs861272	0.80[EUR][1000 genomes]

rSNP related genes

Symbol	Regulation type
TNNT2	Distal transcriptional regulation

rSNP related regulatory elements

Proximal transcriptional regulation

Distal transcriptional regulation

Post-transcriptional regulation:within mature miRNA

Post-transcriptional regulation: associated with RNA binding protein

eQTL evidence (count: 0)