SNP Report
Name | rs832146   dbSNP |
---|---|
Location | chr:1,201269704 |
Allele | G/C |
The LD data used here is based on HapMap rel#27 and 1000 Genomes phase I data. LD SNP pairs were selected with a threshold r2 >=0.8.
rs_ID | r2[population][source] |
---|---|
rs1543805 | 0.86[ASN][1000 genomes] |
rs1543806 | 0.86[ASN][1000 genomes] |
rs1619186 | 0.81[ASN][1000 genomes] |
rs1626370 | 0.85[EUR][1000 genomes];0.92[ASN][1000 genomes] |
rs1628151 | 0.85[EUR][1000 genomes];0.92[ASN][1000 genomes] |
rs1628556 | 0.85[EUR][1000 genomes];0.92[ASN][1000 genomes] |
rs1722742 | 0.84[EUR][1000 genomes];0.91[ASN][1000 genomes] |
rs1722764 | 0.85[EUR][1000 genomes];0.92[ASN][1000 genomes] |
rs1722765 | 0.89[EUR][1000 genomes];0.89[ASN][1000 genomes] |
rs1772828 | 0.87[ASN][1000 genomes] |
rs1772832 | 0.85[EUR][1000 genomes];0.92[ASN][1000 genomes] |
rs1779289 | 0.84[EUR][1000 genomes];0.92[ASN][1000 genomes] |
rs1779293 | 0.85[EUR][1000 genomes];0.92[ASN][1000 genomes] |
rs2071960 | 0.87[ASN][1000 genomes] |
rs2239845 | 0.86[ASN][1000 genomes] |
rs2284438 | 0.82[ASN][1000 genomes] |
rs3819796 | 0.82[ASN][1000 genomes] |
rs3819802 | 0.83[ASN][1000 genomes] |
rs832145 | 1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];0.99[ASN][1000 genomes] |
rs832147 | 1.00[AMR][1000 genomes];0.98[EUR][1000 genomes];1.00[ASN][1000 genomes] |
rs832148 | 1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];0.99[ASN][1000 genomes] |
rs832150 | 0.87[EUR][1000 genomes];0.92[ASN][1000 genomes] |
rs832151 | 0.87[EUR][1000 genomes] |
rs832152 | 0.81[AMR][1000 genomes];0.87[EUR][1000 genomes];0.92[ASN][1000 genomes] |
rs854502 | 0.82[ASN][1000 genomes] |
rs861272 | 0.87[EUR][1000 genomes] |
Symbol | Regulation type |
---|---|
LAD1 | Distal transcriptional regulation |
PHLDA3 | Distal transcriptional regulation |
Copyright: Bioinformatics Lab, Institute of Psychology, Chinese Academy of Sciences Feedback
Last update: March 26, 2014