SNP Report

Basic Infomation

Name	rs17107060 dbSNP
Location	chr:10,82338531
Allele	G/A

LD-proxy of rSNPs(r²>0.8) (count: 32)

The LD data used here is based on HapMap rel#27 and 1000 Genomes phase I data. LD SNP pairs were selected with a threshold r² >=0.8.

rs_ID	r²[population][source]
rs11186011	0.83[EUR][1000 genomes]
rs11186111	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];0.98[ASN][1000 genomes]
rs11186147	0.82[YRI][hapmap]
rs11186149	0.87[YRI][hapmap]
rs11814516	0.84[JPT][hapmap]
rs12241017	0.82[YRI][hapmap]
rs12242580	0.82[YRI][hapmap]
rs12260841	0.83[EUR][1000 genomes]
rs12265331	0.82[YRI][hapmap]
rs12413288	0.83[EUR][1000 genomes]
rs1573973	0.95[JPT][hapmap]
rs17107064	1.00[CHB][hapmap];0.95[JPT][hapmap];0.88[YRI][hapmap];1.00[AFR][1000 genomes];1.00[AMR][1000 genomes];0.83[EUR][1000 genomes];0.98[ASN][1000 genomes]
rs2343527	0.83[EUR][1000 genomes]
rs28493052	0.83[EUR][1000 genomes]
rs4547039	0.95[JPT][hapmap]
rs56856662	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes];0.83[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs59949474	0.90[AFR][1000 genomes];1.00[AMR][1000 genomes];0.83[EUR][1000 genomes];0.98[ASN][1000 genomes]
rs60575307	0.83[EUR][1000 genomes]
rs61105864	0.98[AFR][1000 genomes];1.00[AMR][1000 genomes];0.83[EUR][1000 genomes];0.98[ASN][1000 genomes]
rs7078901	0.95[JPT][hapmap]
rs7079069	0.83[EUR][1000 genomes]
rs7094314	0.85[JPT][hapmap]
rs73307107	0.83[EUR][1000 genomes]
rs73307156	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];0.98[ASN][1000 genomes]
rs73307172	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];0.99[ASN][1000 genomes]
rs7900954	0.83[EUR][1000 genomes]
rs7904557	0.95[JPT][hapmap]
rs7912629	0.80[CHB][hapmap];0.95[JPT][hapmap]
rs7915068	0.82[YRI][hapmap]
rs7915576	0.82[YRI][hapmap]
rs7917419	0.95[JPT][hapmap]
rs7921558	0.82[YRI][hapmap]

rSNP related genes

Symbol	Regulation type
SH2D4B	RNA binding protein mediated regulation

rSNP related regulatory elements

Proximal transcriptional regulation

Distal transcriptional regulation

Post-transcriptional regulation:within mature miRNA

Post-transcriptional regulation: associated with RNA binding protein

eQTL evidence (count: 0)