SNP Report
Basic Infomation
| Name | rs7915068 dbSNP |
|---|---|
| Location | chr:10,82339522 |
| Allele | C/T |
LD-proxy of rSNPs(r2>0.8) (count: 21)
The LD data used here is based on HapMap rel#27 and 1000 Genomes phase I data. LD SNP pairs were selected with a threshold r2 >=0.8.
| rs_ID | r2[population][source] |
|---|---|
| rs11186130 | 1.00[AMR][1000 genomes] |
| rs11186147 | 1.00[YRI][hapmap];1.00[AFR][1000 genomes];1.00[AMR][1000 genomes] |
| rs11186149 | 1.00[YRI][hapmap];0.84[AFR][1000 genomes] |
| rs11186203 | 0.88[YRI][hapmap] |
| rs11186218 | 0.88[YRI][hapmap] |
| rs12240965 | 0.84[AFR][1000 genomes] |
| rs12241017 | 1.00[YRI][hapmap];0.84[AFR][1000 genomes] |
| rs12242580 | 1.00[YRI][hapmap];0.84[AFR][1000 genomes] |
| rs12246043 | 0.82[YRI][hapmap] |
| rs12265331 | 1.00[YRI][hapmap];0.84[AFR][1000 genomes] |
| rs12267574 | 1.00[AMR][1000 genomes] |
| rs17107060 | 0.82[YRI][hapmap] |
| rs17107064 | 0.89[YRI][hapmap] |
| rs61411102 | 0.84[AFR][1000 genomes] |
| rs7067940 | 1.00[AMR][1000 genomes] |
| rs7094398 | 0.85[AFR][1000 genomes];1.00[AMR][1000 genomes] |
| rs73305202 | 1.00[AMR][1000 genomes] |
| rs73307131 | 1.00[AMR][1000 genomes] |
| rs73311203 | 1.00[AMR][1000 genomes] |
| rs7915576 | 1.00[YRI][hapmap];1.00[AFR][1000 genomes];1.00[AMR][1000 genomes] |
| rs7921558 | 1.00[YRI][hapmap];1.00[AFR][1000 genomes];1.00[AMR][1000 genomes] |
rSNP related genes
| Symbol | Regulation type |
|---|---|
| SH2D4B | RNA binding protein mediated regulation |
rSNP related regulatory elements
Proximal transcriptional regulation
Distal transcriptional regulation
Post-transcriptional regulation:within mature miRNA
Post-transcriptional regulation: associated with RNA binding protein
eQTL evidence (count: 0)
Copyright: Bioinformatics Lab, Institute of Psychology, Chinese Academy of Sciences Feedback
Last update: March 26, 2014