SNP Report
Name | rs17031795   dbSNP |
---|---|
Location | chr:1,114255828 |
Allele | T/C |
The LD data used here is based on HapMap rel#27 and 1000 Genomes phase I data. LD SNP pairs were selected with a threshold r2 >=0.8.
rs_ID | r2[population][source] |
---|---|
rs11582409 | 0.84[ASN][1000 genomes] |
rs17274627 | 0.88[AMR][1000 genomes];0.89[EUR][1000 genomes] |
rs17359281 | 0.82[AMR][1000 genomes];0.87[EUR][1000 genomes] |
rs17359378 | 0.88[AMR][1000 genomes];0.89[EUR][1000 genomes] |
rs17359468 | 1.00[AMR][1000 genomes];0.98[EUR][1000 genomes] |
rs17463292 | 0.86[ASN][1000 genomes] |
rs17509844 | 0.84[ASN][1000 genomes] |
rs2146018 | 0.82[AMR][1000 genomes];0.89[EUR][1000 genomes] |
rs3195954 | 0.86[ASN][1000 genomes] |
rs34122108 | 0.84[ASN][1000 genomes] |
rs35173468 | 0.84[ASN][1000 genomes] |
rs3761934 | 0.82[AMR][1000 genomes];0.89[EUR][1000 genomes] |
rs3761935 | 0.86[ASN][1000 genomes] |
rs3765598 | 0.84[ASN][1000 genomes] |
rs3789604 | 0.86[ASN][1000 genomes] |
rs3789608 | 0.84[ASN][1000 genomes] |
rs3811021 | 0.86[ASN][1000 genomes] |
rs3827733 | 0.85[ASN][1000 genomes] |
rs41352847 | 0.82[AMR][1000 genomes];0.89[EUR][1000 genomes] |
rs4393155 | 0.94[AMR][1000 genomes];0.96[EUR][1000 genomes];0.98[ASN][1000 genomes] |
rs4589108 | 1.00[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes] |
rs4839000 | 0.94[AMR][1000 genomes];0.93[EUR][1000 genomes];0.95[ASN][1000 genomes] |
rs4839333 | 0.85[AMR][1000 genomes] |
rs4839341 | 0.85[AMR][1000 genomes];0.93[EUR][1000 genomes];0.96[ASN][1000 genomes] |
rs4839346 | 0.84[ASN][1000 genomes] |
rs55646484 | 0.84[ASN][1000 genomes] |
rs55940960 | 0.86[ASN][1000 genomes] |
rs55951516 | 0.86[ASN][1000 genomes] |
rs6658523 | 0.84[ASN][1000 genomes] |
rs6678422 | 0.86[EUR][1000 genomes] |
Symbol | Regulation type |
---|---|
PHTF1 | RNA binding protein mediated regulation |
Copyright: Bioinformatics Lab, Institute of Psychology, Chinese Academy of Sciences Feedback
Last update: March 26, 2014