SNP Report
Name | rs6678422   dbSNP |
---|---|
Location | chr:1,114204700 |
Allele | A/G |
The LD data used here is based on HapMap rel#27 and 1000 Genomes phase I data. LD SNP pairs were selected with a threshold r2 >=0.8.
rs_ID | r2[population][source] |
---|---|
rs11803395 | 0.87[AFR][1000 genomes] |
rs12144215 | 0.81[EUR][1000 genomes];0.95[ASN][1000 genomes] |
rs1419231 | 0.90[ASN][1000 genomes] |
rs17031795 | 0.86[EUR][1000 genomes] |
rs17274627 | 0.83[AMR][1000 genomes];0.97[EUR][1000 genomes];0.98[ASN][1000 genomes] |
rs17359281 | 0.89[AMR][1000 genomes];0.95[EUR][1000 genomes];1.00[ASN][1000 genomes] |
rs17359378 | 0.83[AMR][1000 genomes];0.97[EUR][1000 genomes];0.98[ASN][1000 genomes] |
rs17359468 | 0.88[EUR][1000 genomes];0.84[ASN][1000 genomes] |
rs17461918 | 0.82[ASN][1000 genomes] |
rs17508449 | 0.81[ASN][1000 genomes] |
rs2146018 | 0.89[AMR][1000 genomes];0.97[EUR][1000 genomes];1.00[ASN][1000 genomes] |
rs3761934 | 0.89[AMR][1000 genomes];0.97[EUR][1000 genomes];1.00[ASN][1000 genomes] |
rs41352847 | 0.89[AMR][1000 genomes];0.97[EUR][1000 genomes];1.00[ASN][1000 genomes] |
rs4393155 | 0.82[EUR][1000 genomes] |
rs4589108 | 0.86[EUR][1000 genomes] |
rs4838993 | 0.92[ASN][1000 genomes] |
rs4838994 | 0.93[ASN][1000 genomes] |
rs4839327 | 0.84[ASN][1000 genomes] |
rs4839329 | 0.92[ASN][1000 genomes] |
rs4839330 | 0.91[ASN][1000 genomes] |
rs4839331 | 0.85[AFR][1000 genomes];0.83[AMR][1000 genomes];0.80[EUR][1000 genomes];0.95[ASN][1000 genomes] |
rs4839332 | 0.80[EUR][1000 genomes];0.94[ASN][1000 genomes] |
rs4839333 | 0.80[AMR][1000 genomes];0.85[EUR][1000 genomes];0.98[ASN][1000 genomes] |
rs4839341 | 0.80[EUR][1000 genomes] |
rs6699022 | 0.84[ASN][1000 genomes] |
rs7514649 | 0.82[ASN][1000 genomes] |
Symbol | Regulation type |
---|---|
MAGI3 | RNA binding protein mediated regulation |
Copyright: Bioinformatics Lab, Institute of Psychology, Chinese Academy of Sciences Feedback
Last update: March 26, 2014