SNP Report
Name | rs13045440   dbSNP |
---|---|
Location | chr:20,44498712 |
Allele | A/G |
The LD data used here is based on HapMap rel#27 and 1000 Genomes phase I data. LD SNP pairs were selected with a threshold r2 >=0.8.
rs_ID | r2[population][source] |
---|---|
rs191805 | 0.89[EUR][1000 genomes] |
rs2075961 | 0.89[EUR][1000 genomes] |
rs2075962 | 0.83[EUR][1000 genomes] |
rs2075963 | 0.89[EUR][1000 genomes] |
rs2903808 | 0.94[AFR][1000 genomes];0.90[AMR][1000 genomes];0.85[EUR][1000 genomes];0.92[ASN][1000 genomes] |
rs3746499 | 0.83[EUR][1000 genomes] |
rs3761156 | 0.86[AFR][1000 genomes];0.89[ASN][1000 genomes] |
rs3817731 | 0.82[EUR][1000 genomes] |
rs3848713 | 0.85[AMR][1000 genomes];0.82[EUR][1000 genomes] |
rs4608591 | 0.89[EUR][1000 genomes] |
rs4810476 | 0.89[EUR][1000 genomes] |
rs4812967 | 0.89[ASN][1000 genomes] |
rs4812974 | 0.86[AMR][1000 genomes];0.81[ASN][1000 genomes] |
rs553359 | 0.84[EUR][1000 genomes] |
rs59782893 | 0.90[EUR][1000 genomes] |
rs6032570 | 0.81[AMR][1000 genomes];0.90[EUR][1000 genomes] |
rs6094220 | 0.93[AFR][1000 genomes];0.88[AMR][1000 genomes];0.82[EUR][1000 genomes];0.92[ASN][1000 genomes] |
rs6094223 | 0.81[EUR][1000 genomes] |
rs6104373 | 0.87[AFR][1000 genomes];0.88[ASN][1000 genomes] |
rs6104374 | 0.94[AFR][1000 genomes];0.88[AMR][1000 genomes];0.81[EUR][1000 genomes];0.89[ASN][1000 genomes] |
rs6514065 | 0.89[AFR][1000 genomes];0.88[AMR][1000 genomes];0.82[EUR][1000 genomes];0.89[ASN][1000 genomes] |
rs742034 | 0.83[EUR][1000 genomes] |
rs760558 | 0.88[ASN][1000 genomes] |
rs8116218 | 0.88[AFR][1000 genomes];0.89[ASN][1000 genomes] |
Symbol | Regulation type |
---|---|
CTSA | Distal transcriptional regulation |
ZSWIM3 | RNA binding protein mediated regulation |
Copyright: Bioinformatics Lab, Institute of Psychology, Chinese Academy of Sciences Feedback
Last update: March 26, 2014