SNP Report

Basic Infomation

LD-proxy of rSNPs(r²>0.8) (count: 24)

The LD data used here is based on HapMap rel#27 and 1000 Genomes phase I data. LD SNP pairs were selected with a threshold r² >=0.8.

rs_ID	r²[population][source]
rs191805	0.89[EUR][1000 genomes]
rs2075961	0.89[EUR][1000 genomes]
rs2075962	0.83[EUR][1000 genomes]
rs2075963	0.89[EUR][1000 genomes]
rs2903808	0.94[AFR][1000 genomes];0.90[AMR][1000 genomes];0.85[EUR][1000 genomes];0.92[ASN][1000 genomes]
rs3746499	0.83[EUR][1000 genomes]
rs3761156	0.86[AFR][1000 genomes];0.89[ASN][1000 genomes]
rs3817731	0.82[EUR][1000 genomes]
rs3848713	0.85[AMR][1000 genomes];0.82[EUR][1000 genomes]
rs4608591	0.89[EUR][1000 genomes]
rs4810476	0.89[EUR][1000 genomes]
rs4812967	0.89[ASN][1000 genomes]
rs4812974	0.86[AMR][1000 genomes];0.81[ASN][1000 genomes]
rs553359	0.84[EUR][1000 genomes]
rs59782893	0.90[EUR][1000 genomes]
rs6032570	0.81[AMR][1000 genomes];0.90[EUR][1000 genomes]
rs6094220	0.93[AFR][1000 genomes];0.88[AMR][1000 genomes];0.82[EUR][1000 genomes];0.92[ASN][1000 genomes]
rs6094223	0.81[EUR][1000 genomes]
rs6104373	0.87[AFR][1000 genomes];0.88[ASN][1000 genomes]
rs6104374	0.94[AFR][1000 genomes];0.88[AMR][1000 genomes];0.81[EUR][1000 genomes];0.89[ASN][1000 genomes]
rs6514065	0.89[AFR][1000 genomes];0.88[AMR][1000 genomes];0.82[EUR][1000 genomes];0.89[ASN][1000 genomes]
rs742034	0.83[EUR][1000 genomes]
rs760558	0.88[ASN][1000 genomes]
rs8116218	0.88[AFR][1000 genomes];0.89[ASN][1000 genomes]

rSNP related genes

Symbol	Regulation type
CTSA	Distal transcriptional regulation
ZSWIM3	RNA binding protein mediated regulation

rSNP related regulatory elements

eQTL evidence (count: 0)