SNP Report
Name | rs12624645   dbSNP |
---|---|
Location | chr:20,44450217 |
Allele | C/G |
The LD data used here is based on HapMap rel#27 and 1000 Genomes phase I data. LD SNP pairs were selected with a threshold r2 >=0.8.
rs_ID | r2[population][source] |
---|---|
rs11699807 | 0.84[ASN][1000 genomes] |
rs11906429 | 0.84[ASN][1000 genomes] |
rs12625621 | 0.84[ASN][1000 genomes] |
rs36051332 | 0.84[ASN][1000 genomes] |
rs373018 | 0.87[AMR][1000 genomes];0.97[EUR][1000 genomes] |
rs378710 | 0.99[AMR][1000 genomes];0.99[EUR][1000 genomes];1.00[ASN][1000 genomes] |
rs383112 | 0.94[AMR][1000 genomes];0.98[EUR][1000 genomes];0.97[ASN][1000 genomes] |
rs3848711 | 0.80[AMR][1000 genomes];0.84[EUR][1000 genomes] |
rs445503 | 0.84[EUR][1000 genomes] |
rs4629 | 0.90[AMR][1000 genomes];0.98[EUR][1000 genomes] |
rs558554 | 0.99[AMR][1000 genomes];0.98[EUR][1000 genomes];1.00[ASN][1000 genomes] |
rs6032533 | 0.83[ASN][1000 genomes] |
rs6032549 | 0.83[ASN][1000 genomes] |
rs6065889 | 0.83[ASN][1000 genomes] |
rs6073912 | 0.83[AFR][1000 genomes];0.83[ASN][1000 genomes] |
rs6073913 | 0.83[AFR][1000 genomes];0.83[ASN][1000 genomes] |
rs6073915 | 0.83[AFR][1000 genomes];0.82[ASN][1000 genomes] |
rs6104355 | 0.84[EUR][1000 genomes] |
rs6124746 | 1.00[AFR][1000 genomes];0.99[AMR][1000 genomes];0.97[EUR][1000 genomes];0.99[ASN][1000 genomes] |
rs6130930 | 0.83[ASN][1000 genomes] |
rs6130941 | 0.87[AFR][1000 genomes];0.92[AMR][1000 genomes];0.94[EUR][1000 genomes];0.95[ASN][1000 genomes] |
rs6130942 | 0.96[AFR][1000 genomes];0.96[AMR][1000 genomes];0.95[EUR][1000 genomes];0.95[ASN][1000 genomes] |
rs62215016 | 0.83[ASN][1000 genomes] |
rs7263437 | 0.83[ASN][1000 genomes] |
Symbol | Regulation type |
---|---|
UBE2C | Distal transcriptional regulation |
PLTP | Distal transcriptional regulation |
WFDC3 | Distal transcriptional regulation |
DNTTIP1 | Distal transcriptional regulation |
PCIF1 | Distal transcriptional regulation |
Copyright: Bioinformatics Lab, Institute of Psychology, Chinese Academy of Sciences Feedback
Last update: March 26, 2014