SNP Report
Name | rs6032549   dbSNP |
---|---|
Location | chr:20,44426319 |
Allele | C/A |
The LD data used here is based on HapMap rel#27 and 1000 Genomes phase I data. LD SNP pairs were selected with a threshold r2 >=0.8.
rs_ID | r2[population][source] |
---|---|
rs11699807 | 0.99[ASN][1000 genomes] |
rs11906429 | 0.96[AFR][1000 genomes];0.95[AMR][1000 genomes];0.96[EUR][1000 genomes];0.99[ASN][1000 genomes] |
rs12624645 | 0.83[ASN][1000 genomes] |
rs12625621 | 0.93[AFR][1000 genomes];0.91[AMR][1000 genomes];0.91[EUR][1000 genomes];0.96[ASN][1000 genomes] |
rs2425748 | 0.80[AMR][1000 genomes];0.82[EUR][1000 genomes] |
rs34959201 | 0.85[AMR][1000 genomes];0.97[EUR][1000 genomes] |
rs36051332 | 1.00[AFR][1000 genomes];0.96[AMR][1000 genomes];0.99[EUR][1000 genomes];0.96[ASN][1000 genomes] |
rs378710 | 0.83[ASN][1000 genomes] |
rs383112 | 0.80[ASN][1000 genomes] |
rs464318 | 0.82[EUR][1000 genomes] |
rs558554 | 0.83[ASN][1000 genomes] |
rs6032533 | 1.00[AFR][1000 genomes];0.98[AMR][1000 genomes];0.98[EUR][1000 genomes];0.94[ASN][1000 genomes] |
rs6065889 | 0.92[ASN][1000 genomes] |
rs6065891 | 0.84[EUR][1000 genomes] |
rs6073912 | 0.97[AMR][1000 genomes];0.98[EUR][1000 genomes];0.94[ASN][1000 genomes] |
rs6073913 | 0.97[AMR][1000 genomes];0.98[EUR][1000 genomes];0.94[ASN][1000 genomes] |
rs6073915 | 0.97[AMR][1000 genomes];0.99[EUR][1000 genomes];0.96[ASN][1000 genomes] |
rs6073916 | 0.93[ASN][1000 genomes] |
rs6124746 | 0.84[ASN][1000 genomes] |
rs6130930 | 0.88[AMR][1000 genomes];0.89[EUR][1000 genomes];0.92[ASN][1000 genomes] |
rs62215016 | 0.88[AMR][1000 genomes];0.96[EUR][1000 genomes];0.92[ASN][1000 genomes] |
rs7263437 | 0.89[AFR][1000 genomes];0.89[AMR][1000 genomes];0.89[EUR][1000 genomes];0.92[ASN][1000 genomes] |
Symbol | Regulation type |
---|---|
ACOT8 | Distal transcriptional regulation |
ZSWIM3 | Distal transcriptional regulation |
ZSWIM1 | Distal transcriptional regulation |
WFDC3 | Distal transcriptional regulation |
DNTTIP1 | Distal transcriptional regulation |
UBE2C | Distal transcriptional regulation |
DNTTIP1 | RNA binding protein mediated regulation |
Copyright: Bioinformatics Lab, Institute of Psychology, Chinese Academy of Sciences Feedback
Last update: March 26, 2014