SNP Report

Basic Infomation

Name	rs11175787 dbSNP
Location	chr:12,40660094
Allele	C/A

LD-proxy of rSNPs(r²>0.8) (count: 45)

The LD data used here is based on HapMap rel#27 and 1000 Genomes phase I data. LD SNP pairs were selected with a threshold r² >=0.8.

rs_ID	r²[population][source]
rs10784444	0.88[ASN][1000 genomes]
rs10784461	0.91[AFR][1000 genomes];0.99[AMR][1000 genomes];0.85[EUR][1000 genomes];0.97[ASN][1000 genomes]
rs10784462	0.91[AFR][1000 genomes];0.99[AMR][1000 genomes];0.85[EUR][1000 genomes];0.97[ASN][1000 genomes]
rs10784470	0.99[ASN][1000 genomes]
rs10784522	0.83[ASN][1000 genomes]
rs10878245	0.88[ASN][1000 genomes]
rs10878249	0.87[ASN][1000 genomes]
rs10878262	0.87[ASN][1000 genomes]
rs10878405	0.83[ASN][1000 genomes]
rs11175769	0.91[AFR][1000 genomes];0.99[AMR][1000 genomes];0.85[EUR][1000 genomes];0.95[ASN][1000 genomes]
rs11175775	0.92[ASN][1000 genomes]
rs11175784	0.90[AFR][1000 genomes];1.00[AMR][1000 genomes];0.94[EUR][1000 genomes];0.98[ASN][1000 genomes]
rs11175836	0.99[ASN][1000 genomes]
rs11175845	0.96[AMR][1000 genomes];0.89[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs11175847	0.96[AMR][1000 genomes];0.90[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs11175862	0.99[ASN][1000 genomes]
rs11175911	0.81[AMR][1000 genomes];0.90[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs11175922	0.88[EUR][1000 genomes];0.95[ASN][1000 genomes]
rs11176030	0.86[ASN][1000 genomes]
rs11564148	0.89[ASN][1000 genomes]
rs12146857	0.99[ASN][1000 genomes]
rs12311273	0.83[ASN][1000 genomes]
rs12367542	0.86[ASN][1000 genomes]
rs12369882	0.81[AMR][1000 genomes];0.89[EUR][1000 genomes];0.98[ASN][1000 genomes]
rs12371502	0.88[ASN][1000 genomes]
rs12820920	0.88[EUR][1000 genomes];0.95[ASN][1000 genomes]
rs1491938	0.88[ASN][1000 genomes]
rs17443815	0.88[EUR][1000 genomes];0.95[ASN][1000 genomes]
rs17444124	0.86[ASN][1000 genomes]
rs17519846	0.96[AMR][1000 genomes];0.90[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs2404580	0.87[ASN][1000 genomes]
rs35124455	0.89[ASN][1000 genomes]
rs4272849	0.97[AMR][1000 genomes];0.94[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs4293189	0.91[AFR][1000 genomes];1.00[AMR][1000 genomes];0.88[EUR][1000 genomes];0.95[ASN][1000 genomes]
rs4768230	0.87[ASN][1000 genomes]
rs7132171	0.89[ASN][1000 genomes]
rs7302841	0.88[ASN][1000 genomes]
rs7309197	0.96[AMR][1000 genomes];0.90[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs732374	0.87[ASN][1000 genomes]
rs7955902	0.87[ASN][1000 genomes]
rs7957754	0.81[AMR][1000 genomes];0.90[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs7962011	0.86[EUR][1000 genomes];0.93[ASN][1000 genomes]
rs7973058	0.89[ASN][1000 genomes]
rs7973479	0.90[EUR][1000 genomes];0.96[ASN][1000 genomes]
rs954884	0.87[ASN][1000 genomes]

rSNP related genes

Symbol	Regulation type
LRRK2	RNA binding protein mediated regulation

rSNP related regulatory elements

Proximal transcriptional regulation

Distal transcriptional regulation

Post-transcriptional regulation:within mature miRNA

Post-transcriptional regulation: associated with RNA binding protein

eQTL evidence (count: 0)