SNP Report
Name | rs11175787   dbSNP |
---|---|
Location | chr:12,40660094 |
Allele | C/A |
The LD data used here is based on HapMap rel#27 and 1000 Genomes phase I data. LD SNP pairs were selected with a threshold r2 >=0.8.
rs_ID | r2[population][source] |
---|---|
rs10784444 | 0.88[ASN][1000 genomes] |
rs10784461 | 0.91[AFR][1000 genomes];0.99[AMR][1000 genomes];0.85[EUR][1000 genomes];0.97[ASN][1000 genomes] |
rs10784462 | 0.91[AFR][1000 genomes];0.99[AMR][1000 genomes];0.85[EUR][1000 genomes];0.97[ASN][1000 genomes] |
rs10784470 | 0.99[ASN][1000 genomes] |
rs10784522 | 0.83[ASN][1000 genomes] |
rs10878245 | 0.88[ASN][1000 genomes] |
rs10878249 | 0.87[ASN][1000 genomes] |
rs10878262 | 0.87[ASN][1000 genomes] |
rs10878405 | 0.83[ASN][1000 genomes] |
rs11175769 | 0.91[AFR][1000 genomes];0.99[AMR][1000 genomes];0.85[EUR][1000 genomes];0.95[ASN][1000 genomes] |
rs11175775 | 0.92[ASN][1000 genomes] |
rs11175784 | 0.90[AFR][1000 genomes];1.00[AMR][1000 genomes];0.94[EUR][1000 genomes];0.98[ASN][1000 genomes] |
rs11175836 | 0.99[ASN][1000 genomes] |
rs11175845 | 0.96[AMR][1000 genomes];0.89[EUR][1000 genomes];1.00[ASN][1000 genomes] |
rs11175847 | 0.96[AMR][1000 genomes];0.90[EUR][1000 genomes];1.00[ASN][1000 genomes] |
rs11175862 | 0.99[ASN][1000 genomes] |
rs11175911 | 0.81[AMR][1000 genomes];0.90[EUR][1000 genomes];1.00[ASN][1000 genomes] |
rs11175922 | 0.88[EUR][1000 genomes];0.95[ASN][1000 genomes] |
rs11176030 | 0.86[ASN][1000 genomes] |
rs11564148 | 0.89[ASN][1000 genomes] |
rs12146857 | 0.99[ASN][1000 genomes] |
rs12311273 | 0.83[ASN][1000 genomes] |
rs12367542 | 0.86[ASN][1000 genomes] |
rs12369882 | 0.81[AMR][1000 genomes];0.89[EUR][1000 genomes];0.98[ASN][1000 genomes] |
rs12371502 | 0.88[ASN][1000 genomes] |
rs12820920 | 0.88[EUR][1000 genomes];0.95[ASN][1000 genomes] |
rs1491938 | 0.88[ASN][1000 genomes] |
rs17443815 | 0.88[EUR][1000 genomes];0.95[ASN][1000 genomes] |
rs17444124 | 0.86[ASN][1000 genomes] |
rs17519846 | 0.96[AMR][1000 genomes];0.90[EUR][1000 genomes];1.00[ASN][1000 genomes] |
rs2404580 | 0.87[ASN][1000 genomes] |
rs35124455 | 0.89[ASN][1000 genomes] |
rs4272849 | 0.97[AMR][1000 genomes];0.94[EUR][1000 genomes];1.00[ASN][1000 genomes] |
rs4293189 | 0.91[AFR][1000 genomes];1.00[AMR][1000 genomes];0.88[EUR][1000 genomes];0.95[ASN][1000 genomes] |
rs4768230 | 0.87[ASN][1000 genomes] |
rs7132171 | 0.89[ASN][1000 genomes] |
rs7302841 | 0.88[ASN][1000 genomes] |
rs7309197 | 0.96[AMR][1000 genomes];0.90[EUR][1000 genomes];1.00[ASN][1000 genomes] |
rs732374 | 0.87[ASN][1000 genomes] |
rs7955902 | 0.87[ASN][1000 genomes] |
rs7957754 | 0.81[AMR][1000 genomes];0.90[EUR][1000 genomes];1.00[ASN][1000 genomes] |
rs7962011 | 0.86[EUR][1000 genomes];0.93[ASN][1000 genomes] |
rs7973058 | 0.89[ASN][1000 genomes] |
rs7973479 | 0.90[EUR][1000 genomes];0.96[ASN][1000 genomes] |
rs954884 | 0.87[ASN][1000 genomes] |
Symbol | Regulation type |
---|---|
LRRK2 | RNA binding protein mediated regulation |
Copyright: Bioinformatics Lab, Institute of Psychology, Chinese Academy of Sciences Feedback
Last update: March 26, 2014