SNP Report
Name | rs9986662   dbSNP |
---|---|
Location | chr:6,21131143 |
Allele | G/A |
The LD data used here is based on HapMap rel#27 and 1000 Genomes phase I data. LD SNP pairs were selected with a threshold r2 >=0.8.
rs_ID | r2[population][source] |
---|---|
rs10946430 | 0.95[CHB][hapmap];0.97[CHD][hapmap];0.94[JPT][hapmap];0.96[ASN][1000 genomes] |
rs11757294 | 0.95[CHB][hapmap];0.94[JPT][hapmap];0.98[ASN][1000 genomes] |
rs12529531 | 0.93[EUR][1000 genomes] |
rs16884524 | 0.93[EUR][1000 genomes] |
rs16884554 | 0.99[EUR][1000 genomes] |
rs2446484 | 0.95[CHB][hapmap];0.92[CHD][hapmap];0.94[JPT][hapmap];0.92[ASN][1000 genomes] |
rs2446487 | 1.00[CHB][hapmap];0.94[JPT][hapmap];0.93[ASN][1000 genomes] |
rs2446489 | 1.00[CHB][hapmap];0.95[CHD][hapmap];0.94[JPT][hapmap];0.93[ASN][1000 genomes] |
rs2493869 | 1.00[CHB][hapmap];0.92[CHD][hapmap];0.94[JPT][hapmap];0.93[ASN][1000 genomes] |
rs4074910 | 0.89[CEU][hapmap];0.80[YRI][hapmap];0.93[EUR][1000 genomes] |
rs4315997 | 0.95[CHB][hapmap];0.94[JPT][hapmap];0.96[ASN][1000 genomes] |
rs4479917 | 0.95[CHB][hapmap];0.92[JPT][hapmap];0.96[ASN][1000 genomes] |
rs4574622 | 0.92[TSI][hapmap];0.88[EUR][1000 genomes] |
rs6456397 | 0.81[ASW][hapmap];0.90[CEU][hapmap];0.94[TSI][hapmap];0.80[YRI][hapmap];0.93[EUR][1000 genomes] |
rs6916667 | 0.83[CEU][hapmap];0.97[EUR][1000 genomes] |
rs6923546 | 0.90[CHB][hapmap];0.95[CHD][hapmap];0.94[JPT][hapmap];0.91[ASN][1000 genomes] |
rs6926818 | 0.96[ASN][1000 genomes] |
rs6927498 | 0.92[EUR][1000 genomes] |
rs72838005 | 0.92[EUR][1000 genomes] |
rs72838010 | 0.95[EUR][1000 genomes] |
rs7741436 | 0.95[CHB][hapmap];0.94[JPT][hapmap];0.96[ASN][1000 genomes] |
rs7751485 | 1.00[CHB][hapmap];0.94[JPT][hapmap];0.98[ASN][1000 genomes] |
rs7773318 | 0.92[ASN][1000 genomes] |
rs9295495 | 0.81[ASW][hapmap];0.90[CEU][hapmap];0.85[GIH][hapmap];1.00[TSI][hapmap];0.80[YRI][hapmap];0.99[EUR][1000 genomes] |
rs9350319 | 0.83[JPT][hapmap] |
rs9356762 | 0.84[JPT][hapmap] |
rs9356764 | 0.90[CHB][hapmap];0.88[JPT][hapmap];0.91[ASN][1000 genomes] |
rs9356765 | 0.95[CHB][hapmap];1.00[JPT][hapmap];0.96[ASN][1000 genomes] |
rs9358391 | 0.83[JPT][hapmap] |
rs9358393 | 1.00[CHB][hapmap];0.97[CHD][hapmap];0.94[JPT][hapmap];0.96[ASN][1000 genomes] |
rs9366379 | 0.95[CEU][hapmap];0.95[CHB][hapmap];0.97[CHD][hapmap];0.88[GIH][hapmap];1.00[JPT][hapmap];0.95[MEX][hapmap];0.84[MKK][hapmap];0.94[TSI][hapmap];0.88[YRI][hapmap];0.92[AMR][1000 genomes];0.94[EUR][1000 genomes];0.98[ASN][1000 genomes] |
rs9460598 | 0.81[ASW][hapmap];0.95[CEU][hapmap];1.00[TSI][hapmap];0.80[YRI][hapmap];0.99[EUR][1000 genomes] |
rs9460599 | 0.82[CEU][hapmap];0.99[EUR][1000 genomes] |
rs9465965 | 0.85[CEU][hapmap];0.92[EUR][1000 genomes] |
rs9465966 | 0.92[EUR][1000 genomes] |
rs9465968 | 0.84[EUR][1000 genomes] |
rs9465970 | 0.80[ASW][hapmap];0.90[CEU][hapmap];0.94[TSI][hapmap];0.80[YRI][hapmap];0.94[EUR][1000 genomes] |
rs9465971 | 0.89[CEU][hapmap];0.99[EUR][1000 genomes] |
rs9465972 | 0.98[EUR][1000 genomes] |
rs959711 | 0.89[ASN][1000 genomes] |
Symbol | Regulation type |
---|---|
CDKAL1 | RNA binding protein mediated regulation |
Copyright: Bioinformatics Lab, Institute of Psychology, Chinese Academy of Sciences Feedback
Last update: March 26, 2014