SNP Report
Basic Infomation
| Name | rs959711 dbSNP |
|---|---|
| Location | chr:6,21138495 |
| Allele | A/G |
LD-proxy of rSNPs(r2>0.8) (count: 27)
The LD data used here is based on HapMap rel#27 and 1000 Genomes phase I data. LD SNP pairs were selected with a threshold r2 >=0.8.
| rs_ID | r2[population][source] |
|---|---|
| rs10946430 | 0.90[ASN][1000 genomes] |
| rs11757294 | 0.91[ASN][1000 genomes] |
| rs11757677 | 0.81[EUR][1000 genomes] |
| rs11963640 | 0.82[EUR][1000 genomes] |
| rs2013346 | 0.82[EUR][1000 genomes] |
| rs2068071 | 0.82[EUR][1000 genomes] |
| rs2446484 | 0.83[AFR][1000 genomes];0.90[AMR][1000 genomes];0.93[EUR][1000 genomes];0.97[ASN][1000 genomes] |
| rs2446487 | 0.81[AMR][1000 genomes];0.94[EUR][1000 genomes];0.97[ASN][1000 genomes] |
| rs2446489 | 0.93[AMR][1000 genomes];0.95[EUR][1000 genomes];0.97[ASN][1000 genomes] |
| rs2493869 | 0.85[AMR][1000 genomes];0.97[EUR][1000 genomes];0.97[ASN][1000 genomes] |
| rs4315997 | 0.90[ASN][1000 genomes] |
| rs4401656 | 0.92[EUR][1000 genomes] |
| rs4454125 | 0.91[EUR][1000 genomes] |
| rs4479917 | 0.90[ASN][1000 genomes] |
| rs6923546 | 0.81[ASN][1000 genomes] |
| rs6926818 | 0.90[ASN][1000 genomes] |
| rs7741436 | 0.90[ASN][1000 genomes] |
| rs7751485 | 0.91[ASN][1000 genomes] |
| rs7773318 | 0.82[ASN][1000 genomes] |
| rs9295492 | 0.82[EUR][1000 genomes] |
| rs9356764 | 0.84[ASN][1000 genomes] |
| rs9356765 | 0.90[ASN][1000 genomes] |
| rs9358393 | 0.92[ASN][1000 genomes] |
| rs9366374 | 0.81[EUR][1000 genomes] |
| rs9366379 | 0.89[ASN][1000 genomes] |
| rs9368271 | 0.81[EUR][1000 genomes] |
| rs9986662 | 0.89[ASN][1000 genomes] |
rSNP related genes
| Symbol | Regulation type |
|---|---|
| CDKAL1 | RNA binding protein mediated regulation |
rSNP related regulatory elements
Proximal transcriptional regulation
Distal transcriptional regulation
Post-transcriptional regulation:within mature miRNA
Post-transcriptional regulation: associated with RNA binding protein
eQTL evidence (count: 0)
Copyright: Bioinformatics Lab, Institute of Psychology, Chinese Academy of Sciences Feedback
Last update: March 26, 2014