SNP Report
Basic Infomation
| Name | rs6926818 dbSNP |
|---|---|
| Location | chr:6,21120583 |
| Allele | T/C |
LD-proxy of rSNPs(r2>0.8) (count: 20)
The LD data used here is based on HapMap rel#27 and 1000 Genomes phase I data. LD SNP pairs were selected with a threshold r2 >=0.8.
| rs_ID | r2[population][source] |
|---|---|
| rs10946430 | 0.99[AFR][1000 genomes];0.98[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes] |
| rs11757294 | 0.82[AFR][1000 genomes];0.95[AMR][1000 genomes];0.97[EUR][1000 genomes];0.98[ASN][1000 genomes] |
| rs2446484 | 0.93[ASN][1000 genomes] |
| rs2446487 | 0.93[ASN][1000 genomes] |
| rs2446489 | 0.93[ASN][1000 genomes] |
| rs2493869 | 0.93[ASN][1000 genomes] |
| rs4315997 | 0.99[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes] |
| rs4479917 | 0.98[AMR][1000 genomes];0.98[EUR][1000 genomes];1.00[ASN][1000 genomes] |
| rs6923546 | 0.90[ASN][1000 genomes] |
| rs6932722 | 0.96[EUR][1000 genomes] |
| rs7741436 | 0.85[AFR][1000 genomes];0.99[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes] |
| rs7751485 | 0.97[AFR][1000 genomes];0.98[AMR][1000 genomes];0.97[EUR][1000 genomes];0.98[ASN][1000 genomes] |
| rs7773318 | 0.91[ASN][1000 genomes] |
| rs9295493 | 0.96[EUR][1000 genomes] |
| rs9356764 | 0.94[EUR][1000 genomes];0.93[ASN][1000 genomes] |
| rs9356765 | 0.93[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes] |
| rs9358393 | 0.95[AMR][1000 genomes];0.97[EUR][1000 genomes];0.95[ASN][1000 genomes] |
| rs9366379 | 0.98[ASN][1000 genomes] |
| rs959711 | 0.90[ASN][1000 genomes] |
| rs9986662 | 0.96[ASN][1000 genomes] |
rSNP related genes
| Symbol | Regulation type |
|---|---|
| CDKAL1 | RNA binding protein mediated regulation |
rSNP related regulatory elements
Proximal transcriptional regulation
Distal transcriptional regulation
Post-transcriptional regulation:within mature miRNA
Post-transcriptional regulation: associated with RNA binding protein
eQTL evidence (count: 0)
Copyright: Bioinformatics Lab, Institute of Psychology, Chinese Academy of Sciences Feedback
Last update: March 26, 2014