SNP Report

Basic Infomation

Name	rs9295493 dbSNP
Location	chr:6,21129457
Allele	C/A

LD-proxy of rSNPs(r²>0.8) (count: 31)

The LD data used here is based on HapMap rel#27 and 1000 Genomes phase I data. LD SNP pairs were selected with a threshold r² >=0.8.

rs_ID	r²[population][source]
rs10946430	0.92[CEU][hapmap];0.85[GIH][hapmap];0.98[TSI][hapmap];0.96[EUR][1000 genomes]
rs11757294	0.96[CEU][hapmap];0.85[YRI][hapmap];0.99[EUR][1000 genomes]
rs12529531	0.87[ASN][1000 genomes]
rs16884524	0.95[ASN][1000 genomes]
rs16884554	0.96[ASN][1000 genomes]
rs4074910	0.94[CHB][hapmap];0.95[JPT][hapmap];0.95[ASN][1000 genomes]
rs4076112	0.94[CHB][hapmap];0.97[CHD][hapmap];0.95[JPT][hapmap];0.94[ASN][1000 genomes]
rs4315997	0.92[CEU][hapmap];0.96[EUR][1000 genomes]
rs4401656	0.91[CHD][hapmap];0.84[JPT][hapmap]
rs4454125	0.91[CHD][hapmap];0.84[JPT][hapmap]
rs4479917	0.92[CEU][hapmap];0.85[YRI][hapmap];0.95[EUR][1000 genomes]
rs4574622	0.88[CHB][hapmap];0.91[CHD][hapmap];0.84[JPT][hapmap];0.87[ASN][1000 genomes]
rs6456397	0.94[CHB][hapmap];0.94[CHD][hapmap];0.95[JPT][hapmap];0.95[ASN][1000 genomes]
rs6916667	1.00[CHB][hapmap];0.84[JPT][hapmap];0.95[ASN][1000 genomes]
rs6926818	0.96[EUR][1000 genomes]
rs6927498	0.92[ASN][1000 genomes]
rs6932722	0.95[AMR][1000 genomes];1.00[EUR][1000 genomes];0.99[ASN][1000 genomes]
rs72838005	0.87[ASN][1000 genomes]
rs72838010	0.96[ASN][1000 genomes]
rs7741436	0.92[CEU][hapmap];0.96[EUR][1000 genomes]
rs7751485	0.96[CEU][hapmap];0.99[EUR][1000 genomes]
rs9295495	1.00[CHB][hapmap];0.91[CHD][hapmap];0.95[JPT][hapmap];0.95[ASN][1000 genomes]
rs9356764	0.81[CEU][hapmap];0.90[EUR][1000 genomes]
rs9356765	0.92[CEU][hapmap];0.82[YRI][hapmap];0.96[EUR][1000 genomes]
rs9358393	0.92[CEU][hapmap];0.84[GIH][hapmap];1.00[TSI][hapmap];0.81[YRI][hapmap];0.99[EUR][1000 genomes]
rs9460598	1.00[CHB][hapmap];0.94[CHD][hapmap];0.95[JPT][hapmap];0.98[ASN][1000 genomes]
rs9460599	0.92[CHB][hapmap];0.95[ASN][1000 genomes]
rs9465966	0.87[ASN][1000 genomes]
rs9465970	1.00[CHB][hapmap];0.94[CHD][hapmap];0.95[JPT][hapmap];0.95[ASN][1000 genomes]
rs9465971	1.00[CHB][hapmap];0.94[JPT][hapmap];0.95[ASN][1000 genomes]
rs9465972	0.95[ASN][1000 genomes]

rSNP related genes

Symbol	Regulation type
CDKAL1	RNA binding protein mediated regulation

rSNP related regulatory elements

Proximal transcriptional regulation

Distal transcriptional regulation

Post-transcriptional regulation:within mature miRNA

Post-transcriptional regulation: associated with RNA binding protein

eQTL evidence (count: 1)